The 2.0 version of rSNPBase

Variant report

Variant rs538855834
Chromosome Location chr9:117691389-117691390
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117673200-117692400 Weak transcription Spleen Spleen
2 chr9:117687800-117693400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:117688400-117693000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
4 chr9:117688600-117692800 Weak transcription Fetal Lung lung
5 chr9:117689000-117693400 Active TSS Thymus Thymus
6 chr9:117689400-117691400 Flanking Active TSS Primary T cells from cord blood blood
7 chr9:117689400-117692000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr9:117689400-117693600 Flanking Active TSS Dnd41 blood
9 chr9:117689600-117691400 Flanking Active TSS Primary B cells from cord blood blood
10 chr9:117689600-117692400 Active TSS Primary T cells fromperipheralblood blood
11 chr9:117689600-117692800 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
12 chr9:117689600-117693000 Active TSS Rectal Mucosa Donor 29 rectum
13 chr9:117689600-117693600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr9:117689800-117692800 Active TSS Duodenum Mucosa Duodenum
15 chr9:117689800-117693200 Active TSS Adipose Nuclei Adipose
16 chr9:117690000-117692000 Active TSS Duodenum Smooth Muscle Duodenum
17 chr9:117690200-117692400 Active TSS Primary monocytes fromperipheralblood blood
18 chr9:117690200-117692800 Active TSS Liver Liver
19 chr9:117690200-117692800 Active TSS Rectal Mucosa Donor 31 rectum
20 chr9:117690200-117693000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr9:117690400-117691600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr9:117690600-117692600 Active TSS Primary T helper cells PMA-I stimulated --
23 chr9:117690600-117693000 Active TSS Primary T helper naive cells from peripheral blood blood
24 chr9:117690600-117693000 Active TSS Primary T helper naive cells fromperipheralblood blood
25 chr9:117690600-117693000 Active TSS Primary T killer memory cells from peripheral blood blood
26 chr9:117690600-117693400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr9:117690800-117691400 Active TSS Right Atrium heart
28 chr9:117690800-117691800 Weak transcription Brain Hippocampus Middle brain
29 chr9:117690800-117691800 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr9:117690800-117692400 Active TSS Primary Natural Killer cells fromperipheralblood blood
31 chr9:117690800-117692400 Active TSS Primary mononuclear cells fromperipheralblood Blood
32 chr9:117690800-117692600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr9:117690800-117693000 Active TSS Primary T killer naive cells fromperipheralblood blood
34 chr9:117691000-117691400 Flanking Active TSS Fetal Thymus thymus
35 chr9:117691000-117691600 Active TSS Placenta Placenta
36 chr9:117691000-117692000 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr9:117691000-117693000 Flanking Active TSS Primary B cells from peripheral blood blood
38 chr9:117691000-117693000 Active TSS Primary T regulatory cells fromperipheralblood blood
39 chr9:117691200-117691400 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr9:117691200-117692000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
41 chr9:117691200-117692600 Active TSS Monocytes-CD14+_RO01746 blood
42 chr9:117691200-117693400 Active TSS Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015