Variant report

Variant	rs538888708
Chromosome Location	chr11:101453057-101453058
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv530644	chr11:101010088-101486038	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv898330	chr11:101243644-101722031	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	esv2754308	chr11:101409790-101502790	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv898331	chr11:101436689-101492630	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv1052159	chr11:101439655-101853293	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	nsv1051457	chr11:101446705-101837650	Weak transcription Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
8	nsv530645	chr11:101451416-101778666	Bivalent/Poised TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101452200-101455200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
2	chr11:101452200-101455600	Active TSS	Breast Myoepithelial Primary Cells	Breast
3	chr11:101452400-101453800	Bivalent/Poised TSS	Fetal Lung	lung
4	chr11:101452400-101453800	Bivalent/Poised TSS	NHDF-Ad	bronchial
5	chr11:101452400-101454800	Active TSS	Right Atrium	heart
6	chr11:101452400-101455200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr11:101452600-101453600	Bivalent/Poised TSS	Adipose Nuclei	Adipose
8	chr11:101452600-101454600	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
9	chr11:101452600-101455000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
10	chr11:101452800-101453200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr11:101452800-101453200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr11:101452800-101453200	Bivalent Enhancer	Brain Germinal Matrix	brain
13	chr11:101452800-101453400	Bivalent/Poised TSS	Fetal Intestine Small	intestine
14	chr11:101452800-101454600	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
15	chr11:101452800-101454800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
16	chr11:101452800-101454800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
17	chr11:101452800-101455000	Active TSS	Rectal Smooth Muscle	rectum
18	chr11:101452800-101455200	Active TSS	Ovary	ovary
19	chr11:101452800-101455400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
20	chr11:101452800-101455600	Active TSS	Brain Anterior Caudate	brain
21	chr11:101453000-101453200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr11:101453000-101453200	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
23	chr11:101453000-101453200	Bivalent/Poised TSS	Placenta	Placenta
24	chr11:101453000-101453200	Bivalent Enhancer	Small Intestine	intestine
25	chr11:101453000-101453200	Flanking Bivalent TSS/Enh	NHEK	skin
26	chr11:101453000-101453400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr11:101453000-101453400	Bivalent/Poised TSS	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr11:101453000-101453400	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr11:101453000-101453400	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr11:101453000-101453400	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
31	chr11:101453000-101453400	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
32	chr11:101453000-101453600	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
33	chr11:101453000-101453600	Flanking Bivalent TSS/Enh	Fetal Brain Female	brain
34	chr11:101453000-101453600	Active TSS	Sigmoid Colon	Sigmoid Colon
35	chr11:101453000-101453800	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr11:101453000-101453800	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
37	chr11:101453000-101453800	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
38	chr11:101453000-101453800	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr11:101453000-101453800	Bivalent/Poised TSS	Fetal Kidney	kidney
40	chr11:101453000-101453800	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
41	chr11:101453000-101453800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
42	chr11:101453000-101454000	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr11:101453000-101454000	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
44	chr11:101453000-101454000	Bivalent/Poised TSS	Left Ventricle	heart
45	chr11:101453000-101454000	Bivalent/Poised TSS	Lung	lung
46	chr11:101453000-101454000	Bivalent/Poised TSS	A549	lung
47	chr11:101453000-101454200	Bivalent/Poised TSS	Right Ventricle	heart
48	chr11:101453000-101454400	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
49	chr11:101453000-101454400	Bivalent/Poised TSS	Esophagus	oesophagus
50	chr11:101453000-101454400	Bivalent/Poised TSS	NHLF	lung

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