Variant report

Variant	rs538963313
Chromosome Location	chr2:33937797-33937798
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3350238	chr2:33849408-33979026	Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv873793	chr2:33936701-33988173	Weak transcription Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
3	nsv873794	chr2:33936701-34103546	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv2220580	chr2:33937798-33937799	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33936400-33938000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:33936600-33938400	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr2:33937000-33937800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr2:33937000-33938200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr2:33937000-33938400	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr2:33937200-33938400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr2:33937400-33938200	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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