Variant report

Variant rs538968077
Chromosome Location chr3:195633917-195633918
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195624000-195634400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:195624400-195634000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:195624600-195634200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr3:195625200-195634400 Weak transcription Colon Smooth Muscle Colon
5 chr3:195625400-195634200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr3:195625400-195634200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:195625400-195634600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr3:195625600-195634200 Weak transcription Left Ventricle heart
9 chr3:195628800-195634800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr3:195629600-195634600 Weak transcription HUVEC blood vessel
11 chr3:195631400-195634200 Enhancers HepG2 liver
12 chr3:195631600-195634200 Active TSS Psoas Muscle Psoas
13 chr3:195632000-195635000 Enhancers Sigmoid Colon Sigmoid Colon
14 chr3:195632400-195635400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
15 chr3:195632600-195637200 Active TSS Pancreatic Islets Pancreatic Islet
16 chr3:195632800-195634000 Enhancers Muscle Satellite Cultured Cells --
17 chr3:195632800-195634000 Active TSS GM12878-XiMat blood
18 chr3:195632800-195634600 Enhancers K562 blood
19 chr3:195632800-195635000 Flanking Active TSS HMEC breast
20 chr3:195632800-195635400 Flanking Active TSS NHEK skin
21 chr3:195632800-195635600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr3:195632800-195635600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:195632800-195635600 Flanking Active TSS Duodenum Mucosa Duodenum
24 chr3:195632800-195635800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr3:195632800-195635800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr3:195633000-195634000 Enhancers Duodenum Smooth Muscle Duodenum
27 chr3:195633000-195634000 Enhancers Fetal Brain Female brain
28 chr3:195633000-195634000 Enhancers Stomach Mucosa stomach
29 chr3:195633000-195634200 Enhancers Small Intestine intestine
30 chr3:195633000-195634800 Enhancers NH-A brain
31 chr3:195633000-195635000 Enhancers Gastric stomach
32 chr3:195633000-195635200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:195633000-195635400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr3:195633000-195635400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr3:195633000-195635600 Flanking Active TSS Liver Liver
36 chr3:195633000-195636000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:195633000-195636000 Flanking Active TSS Dnd41 blood
38 chr3:195633200-195634000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr3:195633200-195634000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
40 chr3:195633200-195634000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
41 chr3:195633200-195634200 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr3:195633200-195634200 Enhancers NHLF lung
43 chr3:195633200-195634800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr3:195633200-195635000 Flanking Active TSS Fetal Muscle Leg muscle
45 chr3:195633200-195635400 Flanking Active TSS Primary monocytes fromperipheralblood blood
46 chr3:195633200-195635400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
47 chr3:195633200-195635400 Flanking Active TSS Primary B cells from peripheral blood blood
48 chr3:195633200-195635400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr3:195633200-195635400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr3:195633200-195635400 Flanking Active TSS Fetal Thymus thymus

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