Variant report

Variant	rs539121436
Chromosome Location	chr4:46982562-46982563
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470031	chr4:46982218-47006399	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46978000-46983000	Weak transcription	Fetal Brain Female	brain
2	chr4:46978400-46986400	Weak transcription	Fetal Brain Male	brain
3	chr4:46978600-46983800	Weak transcription	Brain Anterior Caudate	brain
4	chr4:46981800-46982600	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr4:46982200-46983200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr4:46982200-46983200	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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