Variant report

Variant rs539134939
Chromosome Location chr2:10587738-10587739
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:10577200-10587800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:10585000-10587800 Weak transcription Spleen Spleen
3 chr2:10585200-10587800 Flanking Active TSS Primary B cells from peripheral blood blood
4 chr2:10585200-10588000 Flanking Active TSS Primary B cells from cord blood blood
5 chr2:10585600-10588000 Active TSS Fetal Kidney kidney
6 chr2:10585600-10589000 Active TSS GM12878-XiMat blood
7 chr2:10586000-10589600 Active TSS Pancreatic Islets Pancreatic Islet
8 chr2:10586200-10587800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:10586200-10588200 Active TSS ES-WA7 Cell Line embryonic stem cell
10 chr2:10586200-10588800 Active TSS Fetal Muscle Trunk muscle
11 chr2:10586200-10589000 Active TSS HSMM muscle
12 chr2:10586200-10589000 Active TSS HSMMtube muscle
13 chr2:10586200-10589800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:10586400-10587800 Flanking Active TSS Fetal Muscle Leg muscle
15 chr2:10586400-10588800 Active TSS Colonic Mucosa Colon
16 chr2:10586400-10589000 Active TSS Hela-S3 cervix
17 chr2:10586600-10587800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
18 chr2:10586600-10587800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
19 chr2:10586600-10587800 Flanking Active TSS Fetal Intestine Large intestine
20 chr2:10586600-10587800 Flanking Active TSS HUVEC blood vessel
21 chr2:10586600-10587800 Flanking Active TSS NH-A brain
22 chr2:10586600-10587800 Flanking Active TSS Osteobl bone
23 chr2:10586600-10588200 Flanking Active TSS Stomach Smooth Muscle stomach
24 chr2:10586600-10589000 Active TSS ES-I3 Cell Line embryonic stem cell
25 chr2:10586600-10589000 Active TSS NHLF lung
26 chr2:10586600-10589400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:10586600-10589400 Active TSS Psoas Muscle Psoas
28 chr2:10586600-10589800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr2:10586800-10587800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
30 chr2:10586800-10587800 Flanking Active TSS Liver Liver
31 chr2:10586800-10587800 Active TSS Fetal Brain Male brain
32 chr2:10586800-10587800 Flanking Active TSS Fetal Thymus thymus
33 chr2:10586800-10587800 Flanking Active TSS Thymus Thymus
34 chr2:10586800-10588000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr2:10586800-10588000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr2:10586800-10588200 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr2:10586800-10589400 Active TSS Fetal Brain Female brain
38 chr2:10586800-10589600 Active TSS Lung lung
39 chr2:10587000-10587800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:10587000-10588000 Active TSS Fetal Lung lung
41 chr2:10587000-10588800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:10587000-10589000 Active TSS Sigmoid Colon Sigmoid Colon
43 chr2:10587000-10589000 Active TSS A549 lung
44 chr2:10587000-10589200 Active TSS Brain Anterior Caudate brain
45 chr2:10587000-10589400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr2:10587200-10587800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
47 chr2:10587200-10587800 Flanking Active TSS Primary T cells from cord blood blood
48 chr2:10587200-10587800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr2:10587200-10587800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr2:10587200-10587800 Flanking Active TSS Fetal Heart heart

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