The 2.0 version of rSNPBase

Variant report

Variant rs539208472
Chromosome Location chr15:74007697-74007698
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:73989800-74008800 Weak transcription Small Intestine intestine
2 chr15:73990000-74012000 Weak transcription Fetal Brain Male brain
3 chr15:73990600-74018800 Weak transcription Right Atrium heart
4 chr15:73990800-74009200 Weak transcription Psoas Muscle Psoas
5 chr15:73993400-74007800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr15:73993600-74008000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr15:74002400-74008800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr15:74003200-74015400 Weak transcription Fetal Kidney kidney
9 chr15:74003800-74008600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:74004000-74007800 Weak transcription HUVEC blood vessel
11 chr15:74004000-74010000 Weak transcription Brain Angular Gyrus brain
12 chr15:74004000-74015400 Weak transcription Fetal Lung lung
13 chr15:74004200-74009800 Weak transcription NHDF-Ad bronchial
14 chr15:74004200-74011800 Weak transcription Brain Substantia Nigra brain
15 chr15:74005800-74010800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr15:74006000-74007800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr15:74006000-74008400 Weak transcription HMEC breast
18 chr15:74006000-74008800 Weak transcription Esophagus oesophagus
19 chr15:74006000-74009200 Weak transcription NH-A brain
20 chr15:74006000-74011400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:74006200-74008000 Weak transcription Colonic Mucosa Colon
22 chr15:74006200-74008600 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr15:74006200-74008800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr15:74006200-74011600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr15:74006200-74015800 Weak transcription Rectal Smooth Muscle rectum
26 chr15:74006400-74008200 Weak transcription H1 Cell Line embryonic stem cell
27 chr15:74006400-74008200 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr15:74006400-74008600 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr15:74006400-74008800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr15:74006400-74008800 Weak transcription Pancreas Pancrea
31 chr15:74006400-74009200 Weak transcription NHLF lung
32 chr15:74006400-74012400 Weak transcription Brain Cingulate Gyrus brain
33 chr15:74006600-74008200 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr15:74006600-74008200 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr15:74006600-74008200 Weak transcription Aorta Aorta
36 chr15:74006600-74008400 Weak transcription Colon Smooth Muscle Colon
37 chr15:74006600-74008600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr15:74006600-74008600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr15:74006600-74008800 Weak transcription Lung lung
40 chr15:74006600-74009200 Weak transcription Muscle Satellite Cultured Cells --
41 chr15:74006600-74011800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr15:74006600-74012600 Weak transcription Brain Hippocampus Middle brain
43 chr15:74006600-74015000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr15:74006600-74015000 Weak transcription Brain Anterior Caudate brain
45 chr15:74006600-74015600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr15:74006600-74016600 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr15:74006600-74016600 Weak transcription Gastric stomach
48 chr15:74006600-74016600 Weak transcription Spleen Spleen
49 chr15:74006800-74008200 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr15:74006800-74008400 Weak transcription NHEK skin

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Last update: Aug 31, 2015