The 2.0 version of rSNPBase

Variant report

Variant rs539382428
Chromosome Location chr9:100084886-100084887
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100069400-100092800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr9:100069600-100094400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr9:100069800-100086400 Weak transcription H9 Cell Line embryonic stem cell
4 chr9:100070000-100091400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr9:100070000-100093800 Weak transcription Psoas Muscle Psoas
6 chr9:100070000-100098000 Weak transcription Small Intestine intestine
7 chr9:100070000-100100200 Weak transcription Fetal Heart heart
8 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
9 chr9:100070200-100092600 Weak transcription H1 Cell Line embryonic stem cell
10 chr9:100070200-100095000 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr9:100070400-100091800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr9:100070400-100092800 Weak transcription Colonic Mucosa Colon
13 chr9:100070400-100095200 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr9:100070600-100089600 Weak transcription Osteobl bone
15 chr9:100071000-100094400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr9:100071200-100093000 Strong transcription Stomach Smooth Muscle stomach
17 chr9:100071600-100088800 Strong transcription Brain Germinal Matrix brain
18 chr9:100071600-100089200 Strong transcription Fetal Intestine Small intestine
19 chr9:100071600-100093000 Strong transcription Fetal Stomach stomach
20 chr9:100071600-100093400 Strong transcription Brain Anterior Caudate brain
21 chr9:100071600-100093800 Strong transcription Brain Inferior Temporal Lobe brain
22 chr9:100071600-100093800 Strong transcription Ovary ovary
23 chr9:100071600-100094600 Strong transcription Brain Angular Gyrus brain
24 chr9:100071800-100093400 Strong transcription Adipose Nuclei Adipose
25 chr9:100071800-100093600 Strong transcription Left Ventricle heart
26 chr9:100073000-100089200 Strong transcription Brain Hippocampus Middle brain
27 chr9:100075200-100085000 Weak transcription Esophagus oesophagus
28 chr9:100075600-100089600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr9:100076000-100093200 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr9:100076000-100093600 Weak transcription Placenta Amnion Placenta Amnion
31 chr9:100076200-100092400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr9:100077000-100106400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr9:100077000-100140800 Weak transcription Fetal Brain Male brain
34 chr9:100078000-100087800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr9:100078000-100089000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr9:100078000-100091800 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr9:100078200-100091800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:100078400-100085000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr9:100078400-100087400 Weak transcription Rectal Smooth Muscle rectum
40 chr9:100078400-100092800 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr9:100078600-100085400 Weak transcription Duodenum Mucosa Duodenum
42 chr9:100078800-100085000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr9:100079000-100085000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr9:100079400-100089600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr9:100079600-100085000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr9:100080400-100126400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr9:100080600-100087400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr9:100081000-100085200 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr9:100081000-100085400 Weak transcription Fetal Lung lung
50 chr9:100081400-100086000 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015