Variant report

Variant rs539495478
Chromosome Location chr22:21457542-21457543
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21454400-21457600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
2 chr22:21454400-21457600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr22:21454400-21457600 Enhancers NHLF lung
4 chr22:21454800-21457600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr22:21454800-21457600 Enhancers HSMM muscle
6 chr22:21454800-21457600 Enhancers NH-A brain
7 chr22:21455000-21457600 Enhancers Muscle Satellite Cultured Cells --
8 chr22:21455000-21457600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr22:21455200-21457600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr22:21456800-21457600 Enhancers Primary T cells from cord blood blood
11 chr22:21457000-21457600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr22:21457000-21457600 Bivalent Enhancer Primary T cells fromperipheralblood blood
13 chr22:21457000-21457600 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
14 chr22:21457000-21457600 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr22:21457000-21457600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr22:21457000-21457600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
17 chr22:21457000-21457600 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr22:21457000-21457600 Enhancers Primary T helper cells fromperipheralblood blood
19 chr22:21457000-21457600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr22:21457000-21457600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
21 chr22:21457000-21457600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr22:21457000-21457600 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr22:21457000-21457600 Active TSS Brain Angular Gyrus brain
24 chr22:21457000-21457600 Flanking Active TSS Brain Cingulate Gyrus brain
25 chr22:21457000-21457600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
26 chr22:21457000-21457600 Bivalent Enhancer Fetal Intestine Small intestine
27 chr22:21457000-21457600 Enhancers Placenta Placenta
28 chr22:21457000-21457600 Enhancers Rectal Mucosa Donor 31 rectum
29 chr22:21457000-21457600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
30 chr22:21457000-21457600 Flanking Active TSS Osteobl bone
31 chr22:21457000-21457800 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr22:21457000-21458000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr22:21457000-21458200 Enhancers H1 Cell Line embryonic stem cell
34 chr22:21457200-21457600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr22:21457200-21457600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr22:21457200-21457600 Enhancers Primary monocytes fromperipheralblood blood
37 chr22:21457200-21457600 Enhancers Primary B cells from cord blood blood
38 chr22:21457200-21457600 Enhancers Primary hematopoietic stem cells blood
39 chr22:21457200-21457600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr22:21457200-21457600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr22:21457200-21457600 Enhancers Liver Liver
42 chr22:21457200-21457600 Enhancers Fetal Thymus thymus
43 chr22:21457200-21457600 Enhancers Dnd41 blood
44 chr22:21457200-21457600 Flanking Active TSS K562 blood
45 chr22:21457200-21458200 Active TSS A549 lung
46 chr22:21457200-21460000 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr22:21457400-21457600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr22:21457400-21457600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
49 chr22:21457400-21457600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
50 chr22:21457400-21457600 Flanking Active TSS HUES6 Cell Line embryonic stem cell

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