Variant report

Variant	rs539497486
Chromosome Location	chr4:174044568-174044569
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv3376903	chr4:174044223-174045166	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174040800-174044600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr4:174041400-174044600	Enhancers	Placenta Amnion	Placenta Amnion
3	chr4:174042600-174069000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr4:174044000-174044600	Weak transcription	K562	blood
5	chr4:174044200-174045800	Weak transcription	Hela-S3	cervix
6	chr4:174044200-174046600	Weak transcription	Fetal Thymus	thymus
7	chr4:174044200-174049600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr4:174044400-174044600	Enhancers	Osteobl	bone
9	chr4:174044400-174046600	Weak transcription	Thymus	Thymus

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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