Variant report

Variant	rs539507078
Chromosome Location	chr1:172828743-172828744
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2636908	chr1:172827734-172829200	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172820600-172840200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:172826600-172830400	Weak transcription	Right Atrium	heart
3	chr1:172828400-172828800	Enhancers	HMEC	breast
4	chr1:172828400-172828800	Enhancers	HSMM	muscle
5	chr1:172828400-172828800	Enhancers	NHDF-Ad	bronchial
6	chr1:172828600-172828800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:172828600-172829000	Enhancers	Muscle Satellite Cultured Cells	--
8	chr1:172828600-172829000	Enhancers	NH-A	brain
9	chr1:172828600-172829000	Enhancers	Osteobl	bone
10	chr1:172828600-172829200	Enhancers	NHEK	skin
11	chr1:172828600-172829400	Flanking Active TSS	HUVEC	blood vessel
12	chr1:172828600-172840600	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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