Variant report

Variant	rs539541992
Chromosome Location	chr1:67045165-67045166
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013351	chr1:67039730-67055937	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1003016	chr1:67043120-67067119	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1013476	chr1:67044630-67065911	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67041400-67045600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:67041600-67062400	Weak transcription	Stomach Smooth Muscle	stomach
3	chr1:67042000-67045800	Enhancers	Primary hematopoietic stem cells	blood
4	chr1:67042000-67046200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr1:67042000-67046400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr1:67043000-67046600	Weak transcription	Small Intestine	intestine
7	chr1:67043200-67047600	Weak transcription	Fetal Lung	lung
8	chr1:67043200-67052000	Weak transcription	Brain Angular Gyrus	brain
9	chr1:67043200-67056800	Weak transcription	Brain Anterior Caudate	brain
10	chr1:67043200-67064400	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr1:67043400-67056200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr1:67043600-67050600	Weak transcription	Brain Hippocampus Middle	brain
13	chr1:67043600-67066600	Weak transcription	Fetal Brain Male	brain
14	chr1:67044000-67057200	Weak transcription	Aorta	Aorta
15	chr1:67044200-67064000	Weak transcription	NH-A	brain
16	chr1:67044400-67045800	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr1:67044800-67050600	Weak transcription	NHDF-Ad	bronchial
18	chr1:67044800-67064000	Weak transcription	Osteobl	bone
19	chr1:67045000-67047600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr1:67045000-67050400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr1:67045000-67050600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr1:67045000-67050600	Weak transcription	Muscle Satellite Cultured Cells	--

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