Variant report

Variant	rs539574388
Chromosome Location	chr8:107513530-107513531
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533134	chr8:107307812-107670002	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv824701	chr8:107378298-107520063	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv16884	chr8:107512907-107513857	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107510800-107513800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:107510800-107514400	Enhancers	Brain Hippocampus Middle	brain
3	chr8:107511600-107513600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
4	chr8:107511600-107514000	Enhancers	Fetal Kidney	kidney
5	chr8:107511600-107514400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:107511600-107514400	Enhancers	NHDF-Ad	bronchial
7	chr8:107511600-107514400	Enhancers	Osteobl	bone
8	chr8:107511600-107514600	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr8:107511800-107514000	Enhancers	HMEC	breast
10	chr8:107512000-107513800	Enhancers	Brain Cingulate Gyrus	brain
11	chr8:107512200-107513600	Weak transcription	Primary monocytes fromperipheralblood	blood
12	chr8:107512200-107513800	Weak transcription	Primary hematopoietic stem cells	blood
13	chr8:107512200-107514000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr8:107512200-107514600	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr8:107512400-107513600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr8:107512400-107513600	Enhancers	Brain Angular Gyrus	brain
17	chr8:107512400-107620200	Weak transcription	Aorta	Aorta
18	chr8:107512600-107517800	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr8:107512800-107514000	Enhancers	Adipose Nuclei	Adipose
20	chr8:107513000-107513600	Enhancers	NH-A	brain
21	chr8:107513000-107513800	Enhancers	NHLF	lung
22	chr8:107513000-107514000	Enhancers	H9 Cell Line	embryonic stem cell
23	chr8:107513000-107514400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr8:107513000-107514600	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr8:107513000-107514800	Enhancers	Brain Anterior Caudate	brain
26	chr8:107513200-107514000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr8:107513200-107514000	Enhancers	Fetal Stomach	stomach
28	chr8:107513200-107514200	Enhancers	HUES48 Cell Line	embryonic stem cell
29	chr8:107513200-107514200	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr8:107513200-107514200	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr8:107513200-107514600	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr8:107513400-107513600	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr8:107513400-107513600	Flanking Active TSS	Left Ventricle	heart
34	chr8:107513400-107513600	Flanking Active TSS	GM12878-XiMat	blood
35	chr8:107513400-107513800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr8:107513400-107513800	Enhancers	Brain Substantia Nigra	brain
37	chr8:107513400-107513800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr8:107513400-107513800	Enhancers	Pancreas	Pancrea
39	chr8:107513400-107514000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr8:107513400-107514000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr8:107513400-107514000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr8:107513400-107514000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr8:107513400-107514000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr8:107513400-107514000	Enhancers	Fetal Muscle Leg	muscle
45	chr8:107513400-107514000	Enhancers	Psoas Muscle	Psoas
46	chr8:107513400-107514000	Enhancers	Spleen	Spleen
47	chr8:107513400-107514000	Enhancers	Monocytes-CD14+_RO01746	blood
48	chr8:107513400-107514200	Enhancers	HUVEC	blood vessel
49	chr8:107513400-107514400	Enhancers	HUES6 Cell Line	embryonic stem cell
50	chr8:107513400-107514400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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