The 2.0 version of rSNPBase

Variant report

Variant rs539596702
Chromosome Location chr19:51842781-51842782
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:51841600-51843200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:51841800-51842800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
3 chr19:51841800-51843000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
4 chr19:51841800-51843000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
5 chr19:51841800-51843000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr19:51841800-51843000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
7 chr19:51841800-51843000 Active TSS Fetal Kidney kidney
8 chr19:51841800-51843000 Flanking Active TSS Dnd41 blood
9 chr19:51841800-51843000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr19:51841800-51843200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr19:51841800-51843200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
12 chr19:51841800-51843400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr19:51841800-51843600 Active TSS HUES64 Cell Line embryonic stem cell
14 chr19:51841800-51843600 Active TSS iPS-20b Cell Line embryonic stem cell
15 chr19:51841800-51843600 Active TSS Fetal Intestine Small intestine
16 chr19:51841800-51843800 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr19:51841800-51843800 Active TSS iPS-18 Cell Line embryonic stem cell
18 chr19:51841800-51843800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr19:51841800-51843800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
20 chr19:51841800-51843800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr19:51841800-51844000 Active TSS H9 Cell Line embryonic stem cell
22 chr19:51841800-51844000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:51841800-51844000 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr19:51841800-51844200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr19:51842000-51843000 Active TSS ES-WA7 Cell Line embryonic stem cell
26 chr19:51842000-51843000 Flanking Active TSS Primary B cells from cord blood blood
27 chr19:51842000-51843000 Flanking Active TSS Primary hematopoietic stem cells blood
28 chr19:51842000-51843000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
29 chr19:51842000-51843000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
30 chr19:51842000-51843000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
31 chr19:51842000-51843000 Flanking Active TSS Brain Hippocampus Middle brain
32 chr19:51842000-51843000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
33 chr19:51842000-51843000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
34 chr19:51842000-51843000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
35 chr19:51842000-51843200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
36 chr19:51842000-51843200 Flanking Active TSS Primary B cells from peripheral blood blood
37 chr19:51842000-51843200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
38 chr19:51842000-51843200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr19:51842000-51843200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
40 chr19:51842000-51843400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
41 chr19:51842000-51843600 Active TSS H1 Cell Line embryonic stem cell
42 chr19:51842000-51843600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:51842000-51843600 Active TSS HUES48 Cell Line embryonic stem cell
44 chr19:51842000-51843600 Active TSS HUES6 Cell Line embryonic stem cell
45 chr19:51842000-51843600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr19:51842000-51843600 Active TSS Psoas Muscle Psoas
47 chr19:51842000-51843600 Active TSS Rectal Mucosa Donor 29 rectum
48 chr19:51842000-51843600 Active TSS Right Ventricle heart
49 chr19:51842000-51843800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
50 chr19:51842000-51843800 Active TSS Brain Anterior Caudate brain

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Last update: Aug 31, 2015