Variant report

Variant rs539703340
Chromosome Location chr15:51696535-51696536
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51678200-51697800 Weak transcription Brain Anterior Caudate brain
2 chr15:51687200-51700400 Strong transcription Placenta Placenta
3 chr15:51688800-51708600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr15:51689600-51707000 Weak transcription Adipose Nuclei Adipose
5 chr15:51691600-51696600 Weak transcription Brain Germinal Matrix brain
6 chr15:51692200-51696600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr15:51694000-51697800 Weak transcription Brain Angular Gyrus brain
8 chr15:51694000-51701800 Weak transcription Aorta Aorta
9 chr15:51694200-51698000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr15:51694400-51696800 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr15:51695000-51697800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr15:51695400-51696600 Genic enhancers Brain Hippocampus Middle brain
13 chr15:51695600-51696800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr15:51695600-51696800 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr15:51695800-51698000 Genic enhancers Brain Substantia Nigra brain
16 chr15:51696000-51696600 Enhancers HUES64 Cell Line embryonic stem cell
17 chr15:51696000-51697800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:51696200-51696800 Enhancers H1 Cell Line embryonic stem cell
19 chr15:51696200-51696800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:51696200-51697200 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr15:51696200-51697800 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr15:51696400-51706200 Weak transcription Brain Cingulate Gyrus brain

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