Variant report

Variant	rs539729927
Chromosome Location	chr8:121854688-121854689
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016172	chr8:121679590-121929916	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv891423	chr8:121847643-121994660	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv465790	chr8:121853405-122185415	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv612114	chr8:121853405-122185415	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
5	esv2541936	chr8:121854143-121855735	Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv5575	chr8:121854520-121855230	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv2040336	chr8:121854546-121855263	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3321881	chr8:121854571-121855569	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3479946	chr8:121854632-121855165	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3527882	chr8:121854655-121855172	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3527881	chr8:121854658-121855142	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3527884	chr8:121854673-121855098	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3479945	chr8:121854685-121855139	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:121838400-121869800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:121850400-121855200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:121851800-121856800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr8:121851800-121857200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:121852000-121858200	Enhancers	HepG2	liver
6	chr8:121852400-121856800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr8:121852800-121855200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:121854600-121855000	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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