Variant report

Variant rs539887957
Chromosome Location chr7:27208992-27208993
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27202800-27209600 Flanking Active TSS Adipose Nuclei Adipose
2 chr7:27202800-27214400 Active TSS Psoas Muscle Psoas
3 chr7:27203000-27209200 Flanking Active TSS Primary hematopoietic stem cells blood
4 chr7:27203600-27211000 Active TSS HSMM muscle
5 chr7:27203800-27211200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr7:27204000-27210000 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
7 chr7:27204400-27213000 Bivalent/Poised TSS Fetal Intestine Small intestine
8 chr7:27205200-27209200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr7:27205400-27209000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr7:27205400-27209200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr7:27205400-27209600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
12 chr7:27206200-27210200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
13 chr7:27206600-27210600 Active TSS Colon Smooth Muscle Colon
14 chr7:27206800-27212000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr7:27207000-27211600 Active TSS Rectal Mucosa Donor 29 rectum
16 chr7:27207600-27210000 Bivalent Enhancer Primary T cells fromperipheralblood blood
17 chr7:27207800-27209600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
18 chr7:27208000-27209200 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
19 chr7:27208000-27209200 Bivalent Enhancer Spleen Spleen
20 chr7:27208000-27209400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
21 chr7:27208000-27209800 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr7:27208000-27210000 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr7:27208000-27210000 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
24 chr7:27208000-27210200 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
25 chr7:27208000-27210200 Bivalent/Poised TSS Small Intestine intestine
26 chr7:27208000-27210800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr7:27208000-27214400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr7:27208200-27209000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
29 chr7:27208200-27209000 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
30 chr7:27208200-27209000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
31 chr7:27208200-27209600 Bivalent Enhancer Primary B cells from peripheral blood blood
32 chr7:27208200-27209800 Active TSS Thymus Thymus
33 chr7:27208200-27210200 Bivalent/Poised TSS Fetal Intestine Large intestine
34 chr7:27208200-27211000 Active TSS Rectal Smooth Muscle rectum
35 chr7:27208200-27211200 Active TSS Fetal Kidney kidney
36 chr7:27208400-27209200 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
37 chr7:27208400-27210600 Active TSS HUVEC blood vessel
38 chr7:27208400-27210800 Active TSS NHDF-Ad bronchial
39 chr7:27208400-27211000 Active TSS Rectal Mucosa Donor 31 rectum
40 chr7:27208600-27209000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
41 chr7:27208600-27209000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
42 chr7:27208600-27210000 Active TSS Osteobl bone
43 chr7:27208600-27210200 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
44 chr7:27208600-27210200 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
45 chr7:27208600-27210200 Active TSS Sigmoid Colon Sigmoid Colon
46 chr7:27208600-27211000 Active TSS HSMMtube muscle
47 chr7:27208800-27209000 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood
48 chr7:27208800-27209000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
49 chr7:27208800-27209000 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
50 chr7:27208800-27209000 Bivalent/Poised TSS Fetal Thymus thymus

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