Variant report

Variant	rs540041350
Chromosome Location	chr6:44523700-44523701
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528484	chr6:44520451-44524173	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	esv2421801	chr6:44523033-44524483	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv516165	chr6:44523591-44524173	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv527194	chr6:44523591-44534397	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44513400-44523800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:44520600-44526600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr6:44523000-44531000	Weak transcription	Ovary	ovary
4	chr6:44523200-44526200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:44523600-44524600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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