Variant report
| Variant | rs540137859 |
|---|---|
| Chromosome Location | chr12:12713734-12713735 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12688200-12714400 | Weak transcription | Gastric | stomach |
| 2 | chr12:12701800-12713800 | Weak transcription | HSMM | muscle |
| 3 | chr12:12703800-12713800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr12:12706600-12714400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr12:12711400-12716000 | Active TSS | Fetal Adrenal Gland | Adrenal Gland |
| 6 | chr12:12711600-12714000 | Flanking Active TSS | HUES64 Cell Line | embryonic stem cell |
| 7 | chr12:12711600-12714200 | Weak transcription | Esophagus | oesophagus |
| 8 | chr12:12711600-12716000 | Active TSS | GM12878-XiMat | blood |
| 9 | chr12:12711600-12716200 | Active TSS | Liver | Liver |
| 10 | chr12:12711600-12716200 | Active TSS | Duodenum Mucosa | Duodenum |
| 11 | chr12:12711600-12716200 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 12 | chr12:12712000-12714200 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 13 | chr12:12712000-12716000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 14 | chr12:12712000-12716000 | Active TSS | Fetal Intestine Large | intestine |
| 15 | chr12:12712000-12716200 | Active TSS | Fetal Intestine Small | intestine |
| 16 | chr12:12712200-12716200 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 17 | chr12:12712400-12714800 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 18 | chr12:12712600-12714000 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr12:12712600-12714000 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr12:12712600-12714000 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 21 | chr12:12712600-12716000 | Active TSS | H1 Cell Line | embryonic stem cell |
| 22 | chr12:12712600-12716000 | Active TSS | H9 Cell Line | embryonic stem cell |
| 23 | chr12:12712600-12716000 | Active TSS | Colonic Mucosa | Colon |
| 24 | chr12:12712600-12716000 | Active TSS | Fetal Brain Female | brain |
| 25 | chr12:12712600-12716000 | Active TSS | Thymus | Thymus |
| 26 | chr12:12712600-12716000 | Active TSS | K562 | blood |
| 27 | chr12:12712600-12716200 | Active TSS | NHLF | lung |
| 28 | chr12:12712800-12713800 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 29 | chr12:12712800-12714600 | Transcr. at gene 5' and 3' | Primary T helper 17 cells PMA-I stimulated | -- |
| 30 | chr12:12712800-12716000 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr12:12712800-12716000 | Active TSS | Brain Anterior Caudate | brain |
| 32 | chr12:12712800-12716000 | Active TSS | Fetal Stomach | stomach |
| 33 | chr12:12712800-12716200 | Active TSS | Brain Cingulate Gyrus | brain |
| 34 | chr12:12712800-12716400 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 35 | chr12:12712800-12716400 | Active TSS | Fetal Muscle Trunk | muscle |
| 36 | chr12:12712800-12716400 | Active TSS | Right Atrium | heart |
| 37 | chr12:12712800-12716800 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 38 | chr12:12713000-12713800 | Weak transcription | Left Ventricle | heart |
| 39 | chr12:12713000-12713800 | Weak transcription | Small Intestine | intestine |
| 40 | chr12:12713000-12714000 | Flanking Active TSS | HMEC | breast |
| 41 | chr12:12713000-12716000 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 42 | chr12:12713000-12716000 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr12:12713000-12716000 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 44 | chr12:12713000-12716000 | Active TSS | Fetal Muscle Leg | muscle |
| 45 | chr12:12713000-12716000 | Active TSS | Stomach Smooth Muscle | stomach |
| 46 | chr12:12713000-12716200 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 47 | chr12:12713000-12716200 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 48 | chr12:12713000-12716200 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 49 | chr12:12713200-12714000 | Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 50 | chr12:12713200-12714200 | Active TSS | Fetal Thymus | thymus |
