Variant report
| Variant | rs540187763 |
|---|---|
| Chromosome Location | chr3:51724321-51724322 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:51706400-51733400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 2 | chr3:51706400-51741000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 3 | chr3:51706600-51724600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr3:51706600-51739600 | Weak transcription | Small Intestine | intestine |
| 5 | chr3:51707800-51740400 | Strong transcription | Fetal Intestine Small | intestine |
| 6 | chr3:51708800-51738800 | Strong transcription | Fetal Intestine Large | intestine |
| 7 | chr3:51716200-51726200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 8 | chr3:51716200-51737000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr3:51716400-51741200 | Weak transcription | Fetal Kidney | kidney |
| 10 | chr3:51716600-51724800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 11 | chr3:51716800-51726600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 12 | chr3:51716800-51738800 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 13 | chr3:51717000-51727400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 14 | chr3:51717400-51739800 | Strong transcription | Liver | Liver |
| 15 | chr3:51717800-51725200 | Strong transcription | Gastric | stomach |
| 16 | chr3:51718000-51726800 | Strong transcription | Pancreas | Pancrea |
| 17 | chr3:51719600-51726000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 18 | chr3:51719600-51741200 | Weak transcription | NHDF-Ad | bronchial |
| 19 | chr3:51719800-51732400 | Weak transcription | Hela-S3 | cervix |
| 20 | chr3:51720000-51733200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr3:51720200-51733000 | Weak transcription | Fetal Lung | lung |
| 22 | chr3:51720400-51727200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 23 | chr3:51720600-51739800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 24 | chr3:51720600-51740000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 25 | chr3:51721000-51724600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 26 | chr3:51721000-51735600 | Weak transcription | K562 | blood |
| 27 | chr3:51721000-51738200 | Weak transcription | A549 | lung |
| 28 | chr3:51721000-51741000 | Weak transcription | HUVEC | blood vessel |
| 29 | chr3:51721200-51724400 | Strong transcription | Brain Hippocampus Middle | brain |
| 30 | chr3:51721400-51724400 | Strong transcription | GM12878-XiMat | blood |
| 31 | chr3:51721400-51734200 | Genic enhancers | Primary T cells fromperipheralblood | blood |
| 32 | chr3:51721400-51738800 | Strong transcription | Colonic Mucosa | Colon |
| 33 | chr3:51721400-51739400 | Strong transcription | Thymus | Thymus |
| 34 | chr3:51721400-51739800 | Strong transcription | Duodenum Mucosa | Duodenum |
| 35 | chr3:51721400-51740000 | Strong transcription | Placenta | Placenta |
| 36 | chr3:51721400-51740200 | Strong transcription | Esophagus | oesophagus |
| 37 | chr3:51721400-51740400 | Strong transcription | Dnd41 | blood |
| 38 | chr3:51721400-51740600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 39 | chr3:51721400-51740800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 40 | chr3:51721600-51725000 | Strong transcription | Lung | lung |
| 41 | chr3:51721600-51725200 | Weak transcription | Fetal Brain Female | brain |
| 42 | chr3:51721600-51725400 | Genic enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 43 | chr3:51721600-51726200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr3:51721600-51727600 | Strong transcription | Ovary | ovary |
| 45 | chr3:51721600-51739400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr3:51721600-51740400 | Strong transcription | Fetal Stomach | stomach |
| 47 | chr3:51721600-51740800 | Weak transcription | HSMM | muscle |
| 48 | chr3:51721800-51726600 | Weak transcription | Psoas Muscle | Psoas |
| 49 | chr3:51721800-51740200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 50 | chr3:51722000-51724800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
