The 2.0 version of rSNPBase

Variant report

Variant rs540252113
Chromosome Location chr1:94702234-94702235
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94698200-94702800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:94699200-94703600 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr1:94699600-94703800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr1:94699800-94702400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:94699800-94702600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:94699800-94703200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:94699800-94703400 Active TSS HMEC breast
8 chr1:94700200-94703600 Active TSS Skeletal Muscle Male skeletal muscle
9 chr1:94700400-94702600 Bivalent/Poised TSS Fetal Kidney kidney
10 chr1:94700400-94703200 Active TSS Skeletal Muscle Female skeletal muscle
11 chr1:94700600-94702800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:94700600-94703400 Active TSS Muscle Satellite Cultured Cells --
13 chr1:94700600-94703800 Active TSS Right Atrium heart
14 chr1:94700800-94702400 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
15 chr1:94700800-94702800 Bivalent/Poised TSS Brain Hippocampus Middle brain
16 chr1:94700800-94703200 Bivalent/Poised TSS Brain Anterior Caudate brain
17 chr1:94700800-94703400 Active TSS Stomach Smooth Muscle stomach
18 chr1:94700800-94703600 Active TSS NHLF lung
19 chr1:94700800-94703800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:94701000-94703400 Active TSS Fetal Muscle Trunk muscle
21 chr1:94701000-94703400 Active TSS NHEK skin
22 chr1:94701000-94703600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:94701000-94703600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:94701000-94703600 Active TSS NHDF-Ad bronchial
25 chr1:94701000-94703800 Active TSS Psoas Muscle Psoas
26 chr1:94701000-94703800 Active TSS Right Ventricle heart
27 chr1:94701000-94704000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
28 chr1:94701200-94702400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:94701200-94703000 Active TSS Aorta Aorta
30 chr1:94701200-94703200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
31 chr1:94701200-94703400 Active TSS Fetal Heart heart
32 chr1:94701200-94703600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:94701200-94703600 Active TSS HSMM muscle
34 chr1:94701200-94703600 Active TSS HSMMtube muscle
35 chr1:94701200-94703800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:94701200-94703800 Active TSS Pancreatic Islets Pancreatic Islet
37 chr1:94701200-94703800 Active TSS Left Ventricle heart
38 chr1:94701400-94702400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
39 chr1:94701400-94702400 Bivalent Enhancer Primary T cells fromperipheralblood blood
40 chr1:94701400-94702400 Bivalent/Poised TSS Brain Angular Gyrus brain
41 chr1:94701400-94702400 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
42 chr1:94701400-94702600 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
43 chr1:94701400-94702600 Bivalent/Poised TSS Brain Substantia Nigra brain
44 chr1:94701400-94702600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
45 chr1:94701400-94703400 Active TSS Pancreas Pancrea
46 chr1:94701400-94703400 Active TSS HUVEC blood vessel
47 chr1:94701400-94703400 Active TSS NH-A brain
48 chr1:94701400-94703600 Active TSS Lung lung
49 chr1:94701400-94703600 Active TSS Ovary ovary
50 chr1:94701400-94703600 Active TSS A549 lung

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Last update: Aug 31, 2015