Variant report

Variant rs540264449
Chromosome Location chr3:28632150-28632151
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28628800-28633600 Weak transcription Brain Substantia Nigra brain
2 chr3:28631000-28632400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr3:28631200-28634000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr3:28631400-28632400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr3:28631600-28632200 Active TSS NHLF lung
6 chr3:28631600-28632600 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr3:28631600-28632800 Enhancers HUES48 Cell Line embryonic stem cell
8 chr3:28631600-28632800 Enhancers iPS-18 Cell Line embryonic stem cell
9 chr3:28631600-28633000 Enhancers HSMM muscle
10 chr3:28631800-28632200 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr3:28631800-28632200 Flanking Active TSS Brain Anterior Caudate brain
12 chr3:28631800-28632400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr3:28631800-28632600 Enhancers H9 Cell Line embryonic stem cell
14 chr3:28631800-28632600 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr3:28631800-28632600 Enhancers Osteobl bone
16 chr3:28632000-28632200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr3:28632000-28632200 Flanking Active TSS HSMMtube muscle
18 chr3:28632000-28632400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr3:28632000-28632600 Enhancers HUES6 Cell Line embryonic stem cell
20 chr3:28632000-28632600 Enhancers HUES64 Cell Line embryonic stem cell
21 chr3:28632000-28632600 Flanking Active TSS Muscle Satellite Cultured Cells --
22 chr3:28632000-28632600 Weak transcription Aorta Aorta

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