Variant report

Variant	rs540271208
Chromosome Location	chr14:70717425-70717426
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
3	nsv826972	chr14:70717268-70726035	Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70697400-70719400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr14:70701800-70721200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:70712600-70721000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr14:70716600-70717600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr14:70716800-70717800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr14:70716800-70718000	Enhancers	H1 Cell Line	embryonic stem cell
7	chr14:70717200-70718000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr14:70717200-70718000	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr14:70717200-70718200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr14:70717400-70717800	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr14:70717400-70717800	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr14:70717400-70721000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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