Variant report

Variant	rs540299250
Chromosome Location	chr7:137454813-137454814
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	esv1794849	chr7:137453147-137456707	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	inside rSNPs	diseases
3	nsv511992	chr7:137453319-137457163	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers	lncRNA	n/a	inside rSNPs	diseases
4	esv2428797	chr7:137454120-137455742	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv3338015	chr7:137454237-137456785	Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
6	esv3412977	chr7:137454562-137456635	Weak transcription Enhancers Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137441000-137464400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:137442600-137456200	Weak transcription	HSMM	muscle
3	chr7:137451800-137456000	Weak transcription	HSMMtube	muscle
4	chr7:137451800-137456200	Weak transcription	Osteobl	bone
5	chr7:137452000-137455800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr7:137453400-137456400	Weak transcription	Brain Anterior Caudate	brain
7	chr7:137453400-137459000	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr7:137453600-137456000	Weak transcription	NH-A	brain
9	chr7:137453600-137456400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr7:137453600-137456600	Weak transcription	NHLF	lung
11	chr7:137453600-137457400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr7:137453600-137457600	Weak transcription	Brain Angular Gyrus	brain
13	chr7:137453800-137455800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:137453800-137456000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr7:137453800-137456000	Weak transcription	Adipose Nuclei	Adipose
16	chr7:137453800-137456200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr7:137453800-137457000	Weak transcription	HMEC	breast
18	chr7:137453800-137457400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr7:137454000-137455800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr7:137454000-137456000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr7:137454000-137456400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr7:137454000-137456400	Weak transcription	NHEK	skin
23	chr7:137454000-137456600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr7:137454000-137457600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr7:137454000-137457600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr7:137454000-137459200	Weak transcription	H1 Cell Line	embryonic stem cell
27	chr7:137454000-137459200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
28	chr7:137454000-137459200	Weak transcription	Aorta	Aorta
29	chr7:137454000-137459400	Weak transcription	Esophagus	oesophagus
30	chr7:137454200-137455800	Weak transcription	NHDF-Ad	bronchial

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