Variant report

Variant rs540329
Chromosome Location chr1:10719549-10719550
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
2 chr1:10698800-10726400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr1:10699000-10723000 Weak transcription Psoas Muscle Psoas
5 chr1:10700400-10722800 Weak transcription Ovary ovary
6 chr1:10702600-10721600 Strong transcription Skeletal Muscle Female skeletal muscle
7 chr1:10704400-10720400 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr1:10705400-10725800 Weak transcription HMEC breast
9 chr1:10706400-10724000 Weak transcription Primary B cells from peripheral blood blood
10 chr1:10706600-10723200 Weak transcription Right Atrium heart
11 chr1:10707800-10731200 Weak transcription NHEK skin
12 chr1:10710200-10723400 Weak transcription Brain Anterior Caudate brain
13 chr1:10710600-10721600 Strong transcription Esophagus oesophagus
14 chr1:10711400-10722000 Strong transcription Spleen Spleen
15 chr1:10711600-10726600 Strong transcription Duodenum Mucosa Duodenum
16 chr1:10711600-10728400 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:10711800-10720800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:10711800-10721400 Weak transcription Fetal Kidney kidney
19 chr1:10712000-10720600 Strong transcription Skeletal Muscle Male skeletal muscle
20 chr1:10712000-10721400 Strong transcription Fetal Intestine Small intestine
21 chr1:10712000-10721600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:10712000-10723000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:10712200-10723400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:10712400-10722000 Weak transcription Fetal Lung lung
25 chr1:10712600-10737000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:10713000-10722800 Weak transcription Liver Liver
27 chr1:10713400-10719600 Bivalent Enhancer Fetal Stomach stomach
28 chr1:10713600-10721200 Strong transcription Pancreas Pancrea
29 chr1:10714200-10723000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:10714200-10723400 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:10714400-10721200 Strong transcription Right Ventricle heart
32 chr1:10714400-10723200 Weak transcription HSMMtube muscle
33 chr1:10714400-10729200 Weak transcription Primary hematopoietic stem cells blood
34 chr1:10714600-10730200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:10714600-10731400 Weak transcription Small Intestine intestine
36 chr1:10714800-10723400 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:10714800-10727000 Weak transcription Dnd41 blood
38 chr1:10715800-10719600 Strong transcription Placenta Placenta
39 chr1:10716200-10723200 Weak transcription Brain Hippocampus Middle brain
40 chr1:10716800-10719800 Enhancers Fetal Heart heart
41 chr1:10717000-10719800 Bivalent Enhancer Fetal Muscle Trunk muscle
42 chr1:10717200-10719600 Genic enhancers Fetal Muscle Leg muscle
43 chr1:10717400-10720600 Strong transcription Aorta Aorta
44 chr1:10717600-10720800 Strong transcription Colonic Mucosa Colon
45 chr1:10717800-10723000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:10717800-10723000 Weak transcription Brain Germinal Matrix brain
47 chr1:10718200-10720600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
48 chr1:10718200-10720600 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:10718200-10720600 Strong transcription Left Ventricle heart
50 chr1:10718200-10720800 Strong transcription Thymus Thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links