Variant report

Variant	rs540429253
Chromosome Location	chr18:29737438-29737439
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056007	chr18:29711974-29899564	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	esv32777	chr18:29737074-29738017	Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:29730400-29738000	Weak transcription	Fetal Lung	lung
2	chr18:29736200-29738200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr18:29736400-29738200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr18:29736600-29738000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr18:29736800-29738200	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr18:29737400-29737600	Enhancers	Hela-S3	cervix
7	chr18:29737400-29737800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr18:29737400-29737800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr18:29737400-29738000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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