Variant report

Variant rs540470010
Chromosome Location chr8:48645501-48645502
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:48597200-48647200 Weak transcription NHEK skin
2 chr8:48597200-48647400 Weak transcription HMEC breast
3 chr8:48602800-48647800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr8:48604400-48648400 Weak transcription Small Intestine intestine
5 chr8:48606800-48646400 Weak transcription Fetal Heart heart
6 chr8:48612000-48647400 Weak transcription NH-A brain
7 chr8:48613600-48647200 Weak transcription A549 lung
8 chr8:48618000-48648800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr8:48618200-48651200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr8:48619200-48648400 Weak transcription H9 Cell Line embryonic stem cell
11 chr8:48619200-48649000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr8:48619600-48647600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr8:48624400-48647800 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr8:48626200-48646000 Weak transcription Colonic Mucosa Colon
15 chr8:48626600-48646400 Weak transcription Osteobl bone
16 chr8:48626600-48646600 Weak transcription Primary T cells fromperipheralblood blood
17 chr8:48626600-48648200 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr8:48627000-48646200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr8:48627000-48646800 Weak transcription Rectal Smooth Muscle rectum
20 chr8:48627000-48647000 Weak transcription Fetal Kidney kidney
21 chr8:48627000-48647200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr8:48627000-48647200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr8:48632600-48647200 Weak transcription Aorta Aorta
24 chr8:48632800-48646800 Weak transcription Placenta Amnion Placenta Amnion
25 chr8:48632800-48648600 Weak transcription Brain Germinal Matrix brain
26 chr8:48633000-48646000 Weak transcription Colon Smooth Muscle Colon
27 chr8:48633000-48646400 Weak transcription Brain Cingulate Gyrus brain
28 chr8:48633200-48647600 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr8:48635000-48646600 Weak transcription Brain Angular Gyrus brain
30 chr8:48635200-48646800 Weak transcription Brain Substantia Nigra brain
31 chr8:48635800-48646600 Weak transcription Brain Hippocampus Middle brain
32 chr8:48635800-48646800 Weak transcription Brain Anterior Caudate brain
33 chr8:48635800-48647400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr8:48637000-48646400 Weak transcription Stomach Mucosa stomach
35 chr8:48637200-48646200 Weak transcription Left Ventricle heart
36 chr8:48637200-48646200 Weak transcription NHDF-Ad bronchial
37 chr8:48637400-48646800 Weak transcription HepG2 liver
38 chr8:48637800-48649600 Weak transcription Dnd41 blood
39 chr8:48638200-48646200 Weak transcription Ovary ovary
40 chr8:48639200-48646200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr8:48639600-48651000 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr8:48640000-48646800 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr8:48640000-48646800 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr8:48640000-48647600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr8:48640200-48646200 Strong transcription Fetal Intestine Small intestine
46 chr8:48640200-48647000 Weak transcription Fetal Thymus thymus
47 chr8:48640200-48647400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr8:48641400-48647600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr8:48641600-48646600 Strong transcription Fetal Stomach stomach
50 chr8:48641800-48649000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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