Variant report

Variant rs540499172
Chromosome Location chr7:38379250-38379251
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:38371800-38380600 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr7:38375400-38380800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr7:38375600-38380000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr7:38375600-38380000 Weak transcription Spleen Spleen
5 chr7:38375800-38379800 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr7:38375800-38380000 Weak transcription Fetal Muscle Trunk muscle
7 chr7:38375800-38380400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr7:38375800-38380400 Weak transcription A549 lung
9 chr7:38375800-38380800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr7:38375800-38380800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr7:38375800-38380800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr7:38375800-38380800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr7:38376000-38379800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr7:38376000-38379800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr7:38376000-38380000 Weak transcription Fetal Stomach stomach
16 chr7:38376000-38380400 Weak transcription Fetal Muscle Leg muscle
17 chr7:38376000-38380400 Weak transcription Thymus Thymus
18 chr7:38376000-38380400 Weak transcription GM12878-XiMat blood
19 chr7:38376000-38380600 Weak transcription Adipose Nuclei Adipose
20 chr7:38376200-38379800 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr7:38376400-38379800 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr7:38376400-38379800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr7:38376400-38380600 Weak transcription Primary B cells from cord blood blood
24 chr7:38376400-38381000 Weak transcription Duodenum Mucosa Duodenum
25 chr7:38376600-38379800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr7:38376600-38380000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr7:38376600-38380600 Weak transcription Primary B cells from peripheral blood blood
28 chr7:38376800-38379800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr7:38376800-38380800 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr7:38377000-38379600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr7:38377000-38379800 Weak transcription Primary T cells from cord blood blood
32 chr7:38377400-38379800 Weak transcription Primary T cells fromperipheralblood blood
33 chr7:38377400-38379800 Weak transcription Primary hematopoietic stem cells blood
34 chr7:38377400-38379800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr7:38377400-38379800 Weak transcription Fetal Intestine Small intestine
36 chr7:38377400-38379800 Weak transcription Fetal Thymus thymus
37 chr7:38377400-38380000 Weak transcription Pancreas Pancrea
38 chr7:38377600-38379800 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr7:38377600-38379800 Weak transcription Fetal Intestine Large intestine
40 chr7:38377600-38379800 Weak transcription Placenta Placenta
41 chr7:38377600-38379800 Active TSS K562 blood
42 chr7:38378200-38380000 Weak transcription Primary monocytes fromperipheralblood blood
43 chr7:38378200-38380200 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr7:38378800-38379800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr7:38378800-38380000 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr7:38379000-38380400 Enhancers Dnd41 blood
47 chr7:38379200-38381600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood

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