Variant report

Variant rs540512281
Chromosome Location chr4:187026031-187026032
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187025400-187026200 Bivalent Enhancer Primary B cells from peripheral blood blood
2 chr4:187025400-187026200 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr4:187025400-187026200 Active TSS Colonic Mucosa Colon
4 chr4:187025400-187026200 Active TSS Duodenum Smooth Muscle Duodenum
5 chr4:187025400-187026800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr4:187025400-187026800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
7 chr4:187025400-187026800 Flanking Active TSS Adipose Nuclei Adipose
8 chr4:187025400-187026800 Bivalent/Poised TSS Brain Hippocampus Middle brain
9 chr4:187025400-187026800 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
10 chr4:187025400-187027000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
11 chr4:187025400-187027000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr4:187025400-187027000 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
13 chr4:187025400-187027000 Active TSS Duodenum Mucosa Duodenum
14 chr4:187025400-187027200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr4:187025400-187027200 Active TSS Colon Smooth Muscle Colon
16 chr4:187025400-187027200 Active TSS Fetal Kidney kidney
17 chr4:187025400-187027400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
18 chr4:187025400-187028400 Active TSS Pancreatic Islets Pancreatic Islet
19 chr4:187025600-187026200 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
20 chr4:187025600-187026200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
21 chr4:187025600-187026200 Active TSS Brain Substantia Nigra brain
22 chr4:187025600-187026200 Bivalent/Poised TSS HSMMtube muscle
23 chr4:187025600-187026200 Bivalent/Poised TSS NHEK skin
24 chr4:187025600-187026200 Bivalent/Poised TSS NHLF lung
25 chr4:187025600-187026400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:187025600-187026400 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr4:187025600-187026400 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
28 chr4:187025600-187026400 Bivalent/Poised TSS Brain Angular Gyrus brain
29 chr4:187025600-187026400 Bivalent/Poised TSS Psoas Muscle Psoas
30 chr4:187025600-187026400 Enhancers Spleen Spleen
31 chr4:187025600-187026400 Bivalent/Poised TSS HSMM muscle
32 chr4:187025600-187026400 Bivalent/Poised TSS NH-A brain
33 chr4:187025600-187026400 Bivalent/Poised TSS Osteobl bone
34 chr4:187025600-187026600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
35 chr4:187025600-187026600 Bivalent/Poised TSS A549 lung
36 chr4:187025600-187026600 Bivalent/Poised TSS HepG2 liver
37 chr4:187025600-187026600 Flanking Bivalent TSS/Enh HMEC breast
38 chr4:187025600-187026800 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
39 chr4:187025600-187026800 Bivalent/Poised TSS Primary T cells effector/memory enriched fromperipheralblood blood
40 chr4:187025600-187026800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
41 chr4:187025600-187026800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:187025600-187027000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr4:187025600-187027000 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr4:187025600-187027000 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:187025600-187027000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
46 chr4:187025600-187027000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
47 chr4:187025600-187027000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr4:187025600-187027000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
49 chr4:187025600-187027000 Active TSS Rectal Mucosa Donor 31 rectum
50 chr4:187025600-187027000 Active TSS Small Intestine intestine

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