The 2.0 version of rSNPBase

Variant report

Variant rs540633893
Chromosome Location chr6:15576620-15576621
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:15534400-15609800 Weak transcription Thymus Thymus
2 chr6:15552400-15577400 Weak transcription Lung lung
3 chr6:15552400-15578200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:15554400-15577600 Weak transcription Aorta Aorta
5 chr6:15557200-15577600 Weak transcription Spleen Spleen
6 chr6:15561600-15578200 Weak transcription Pancreas Pancrea
7 chr6:15562200-15580400 Weak transcription Fetal Thymus thymus
8 chr6:15562200-15588800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:15563400-15577600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:15563400-15577800 Weak transcription Brain Anterior Caudate brain
11 chr6:15563400-15604200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr6:15564000-15586800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:15565400-15593200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr6:15565800-15595800 Weak transcription Primary hematopoietic stem cells blood
15 chr6:15567200-15593800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:15570000-15578000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr6:15570000-15578200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:15570000-15581200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr6:15570200-15581000 Weak transcription Left Ventricle heart
20 chr6:15570400-15578200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:15570400-15578200 Weak transcription Rectal Smooth Muscle rectum
22 chr6:15570400-15583400 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr6:15571200-15593000 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr6:15573200-15577800 Weak transcription Gastric stomach
25 chr6:15574000-15596800 Weak transcription Fetal Intestine Small intestine
26 chr6:15574600-15577600 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr6:15574800-15577400 Weak transcription Primary B cells from cord blood blood
28 chr6:15574800-15577600 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:15574800-15577600 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr6:15574800-15577600 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr6:15574800-15577800 Weak transcription H9 Cell Line embryonic stem cell
32 chr6:15574800-15592400 Weak transcription Dnd41 blood
33 chr6:15574800-15603600 Weak transcription Primary B cells from peripheral blood blood
34 chr6:15575000-15577600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr6:15575000-15577600 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr6:15575000-15577800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr6:15575000-15578200 Weak transcription Placenta Placenta
38 chr6:15575200-15578000 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr6:15575400-15577400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr6:15575400-15592600 Weak transcription Primary T cells from cord blood blood
41 chr6:15575800-15577000 Enhancers Primary monocytes fromperipheralblood blood
42 chr6:15576000-15596200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr6:15576200-15577400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr6:15576400-15577200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr6:15576400-15579000 Weak transcription GM12878-XiMat blood
46 chr6:15576400-15580400 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr6:15576400-15582000 Weak transcription K562 blood
48 chr6:15576600-15577400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015