Variant report
| Variant | rs540756146 |
|---|---|
| Chromosome Location | chr20:24468925-24468926 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:24457600-24470600 | Weak transcription | Fetal Brain Female | brain |
| 2 | chr20:24459400-24471000 | Weak transcription | Fetal Muscle Leg | muscle |
| 3 | chr20:24459400-24471800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 4 | chr20:24459600-24472000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 5 | chr20:24460200-24469600 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr20:24460200-24471400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 7 | chr20:24460200-24472600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 8 | chr20:24460400-24469600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr20:24460800-24469800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 10 | chr20:24460800-24483800 | Weak transcription | Aorta | Aorta |
| 11 | chr20:24461400-24469800 | Weak transcription | Fetal Brain Male | brain |
| 12 | chr20:24462200-24469000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 13 | chr20:24462400-24469800 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr20:24462400-24472600 | Weak transcription | Right Atrium | heart |
| 15 | chr20:24463200-24469600 | Weak transcription | Fetal Lung | lung |
| 16 | chr20:24464600-24472000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 17 | chr20:24465000-24472800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 18 | chr20:24465200-24469800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 19 | chr20:24465200-24469800 | Weak transcription | Gastric | stomach |
| 20 | chr20:24466400-24469400 | Weak transcription | Brain Germinal Matrix | brain |
| 21 | chr20:24466600-24469800 | Enhancers | Fetal Heart | heart |
| 22 | chr20:24466800-24469000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr20:24467000-24469800 | Weak transcription | Right Ventricle | heart |
| 24 | chr20:24467600-24472800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 25 | chr20:24468200-24470000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr20:24468200-24470400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 27 | chr20:24468200-24470400 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 28 | chr20:24468200-24470400 | Genic enhancers | Brain Cingulate Gyrus | brain |
| 29 | chr20:24468400-24469200 | Genic enhancers | Brain Hippocampus Middle | brain |
| 30 | chr20:24468400-24469400 | Enhancers | Colonic Mucosa | Colon |
| 31 | chr20:24468400-24469400 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 32 | chr20:24468400-24469800 | Weak transcription | Brain Angular Gyrus | brain |
| 33 | chr20:24468400-24470200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 34 | chr20:24468400-24470400 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr20:24468600-24469000 | Genic enhancers | Brain Substantia Nigra | brain |
| 36 | chr20:24468600-24469200 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr20:24468600-24470000 | Weak transcription | Left Ventricle | heart |
| 38 | chr20:24468800-24469200 | Enhancers | Fetal Thymus | thymus |
| 39 | chr20:24468800-24470400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr20:24468800-24470400 | Enhancers | HMEC | breast |
