The 2.0 version of rSNPBase

Variant report

Variant rs540863990
Chromosome Location chr14:71875265-71875266
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:71851400-71878200 Weak transcription Pancreas Pancrea
2 chr14:71859000-71878200 Weak transcription Lung lung
3 chr14:71861000-71885200 Weak transcription K562 blood
4 chr14:71862600-71878200 Weak transcription Spleen Spleen
5 chr14:71866000-71877400 Weak transcription Stomach Mucosa stomach
6 chr14:71866000-71877600 Weak transcription HepG2 liver
7 chr14:71866000-71889000 Weak transcription Dnd41 blood
8 chr14:71866800-71875400 Weak transcription Fetal Thymus thymus
9 chr14:71867200-71892200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr14:71867800-71877400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr14:71867800-71881600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr14:71867800-71885000 Weak transcription Brain Substantia Nigra brain
13 chr14:71868000-71875600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr14:71868000-71876600 Weak transcription Fetal Lung lung
15 chr14:71868000-71878000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr14:71868000-71878200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr14:71868200-71877400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr14:71868200-71891400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr14:71868400-71878200 Weak transcription HMEC breast
20 chr14:71868400-71881200 Weak transcription NHLF lung
21 chr14:71869000-71875800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr14:71869400-71875400 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr14:71869400-71878000 Weak transcription NHEK skin
24 chr14:71869400-71878200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr14:71869600-71904200 Weak transcription Hela-S3 cervix
26 chr14:71870600-71878200 Weak transcription Duodenum Mucosa Duodenum
27 chr14:71870600-71891000 Weak transcription Primary T cells fromperipheralblood blood
28 chr14:71871000-71877600 Weak transcription Primary T cells from cord blood blood
29 chr14:71871400-71880600 Weak transcription Primary B cells from peripheral blood blood
30 chr14:71871600-71899600 Weak transcription Primary B cells from cord blood blood
31 chr14:71872400-71877400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr14:71872600-71877200 Weak transcription GM12878-XiMat blood
33 chr14:71872600-71885000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr14:71872800-71877400 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr14:71874400-71877600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr14:71874400-71897000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr14:71874600-71875400 Enhancers Brain Angular Gyrus brain
38 chr14:71874600-71876000 Enhancers Fetal Heart heart
39 chr14:71874600-71880000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr14:71874800-71876000 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr14:71874800-71876000 Enhancers Osteobl bone
42 chr14:71874800-71876600 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr14:71874800-71879400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr14:71875000-71875400 Flanking Active TSS HSMMtube muscle
45 chr14:71875000-71875600 Enhancers HUES64 Cell Line embryonic stem cell
46 chr14:71875000-71875800 Enhancers Aorta Aorta
47 chr14:71875000-71875800 Enhancers NH-A brain
48 chr14:71875000-71875800 Enhancers NHDF-Ad bronchial
49 chr14:71875000-71876000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr14:71875000-71876200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015