Variant report

Variant rs541020889
Chromosome Location chr7:65843858-65843859
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65817600-65844200 Weak transcription Right Atrium heart
2 chr7:65817600-65844600 Weak transcription Fetal Brain Female brain
3 chr7:65819200-65844200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr7:65825000-65844400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr7:65825200-65844200 Weak transcription NHLF lung
6 chr7:65831800-65844200 Weak transcription NHDF-Ad bronchial
7 chr7:65832000-65844200 Weak transcription Fetal Lung lung
8 chr7:65836600-65846400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr7:65838800-65844600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr7:65839000-65844000 Weak transcription Primary hematopoietic stem cells blood
11 chr7:65839000-65844000 Weak transcription Placenta Placenta
12 chr7:65839000-65844800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr7:65839400-65844400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:65839400-65844600 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr7:65839800-65844000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr7:65839800-65844200 Weak transcription Muscle Satellite Cultured Cells --
17 chr7:65839800-65844200 Weak transcription Brain Anterior Caudate brain
18 chr7:65839800-65845200 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr7:65840000-65878400 Weak transcription Psoas Muscle Psoas
20 chr7:65840200-65844800 Strong transcription Fetal Muscle Leg muscle
21 chr7:65840400-65844400 Weak transcription Primary B cells from peripheral blood blood
22 chr7:65840400-65844400 Weak transcription HepG2 liver
23 chr7:65840400-65873400 Weak transcription K562 blood
24 chr7:65840600-65858400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr7:65841200-65844000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr7:65841200-65844200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
27 chr7:65841200-65844400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr7:65841200-65847600 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr7:65841400-65844000 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr7:65841400-65844000 Weak transcription Placenta Amnion Placenta Amnion
31 chr7:65841400-65844200 Weak transcription Left Ventricle heart
32 chr7:65841400-65875400 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr7:65841600-65845000 Strong transcription Right Ventricle heart
34 chr7:65841800-65844600 Weak transcription Primary B cells from cord blood blood
35 chr7:65841800-65844800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr7:65841800-65845400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr7:65842000-65844000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr7:65842200-65844200 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr7:65842200-65844400 Strong transcription Spleen Spleen
40 chr7:65842400-65844000 Weak transcription Fetal Thymus thymus
41 chr7:65842400-65844000 Weak transcription Rectal Smooth Muscle rectum
42 chr7:65842400-65844200 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr7:65842400-65844400 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr7:65842400-65844400 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr7:65842400-65845000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr7:65842400-65867800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr7:65842600-65844400 Strong transcription Stomach Smooth Muscle stomach
48 chr7:65842600-65844800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr7:65842600-65845400 Strong transcription Fetal Intestine Large intestine
50 chr7:65842600-65845400 Strong transcription Pancreas Pancrea

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