Variant report

Variant	rs541114301
Chromosome Location	chr4:97966528-97966529
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879640	chr4:97711707-98697586	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1005103	chr4:97914293-98011695	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3385793	chr4:97965729-97969127	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97965600-97967000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr4:97965800-97966800	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr4:97966000-97966600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
4	chr4:97966000-97966600	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr4:97966000-97967000	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr4:97966000-97967000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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