Variant report

Variant	rs541177019
Chromosome Location	chr3:56734084-56734085
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56715683..56718669-chr3:56731865..56734737,3	K562	blood:
2	chr3:56716874..56719252-chr3:56732973..56734497,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000163946	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv237149	chr3:56732922-56738481	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56729800-56738600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr3:56730000-56738600	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr3:56730400-56738600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr3:56731000-56736400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr3:56731000-56736400	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr3:56731000-56736400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr3:56731000-56736800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr3:56731000-56736800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr3:56731200-56734200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:56731200-56736400	Weak transcription	Primary T cells fromperipheralblood	blood
11	chr3:56731200-56736400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr3:56731200-56738600	Weak transcription	Primary T cells from cord blood	blood
13	chr3:56731200-56738600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
14	chr3:56731200-56738600	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr3:56733400-56738600	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr3:56734000-56734400	Weak transcription	Placenta	Placenta
17	chr3:56734000-56734600	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr3:56734000-56734600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr3:56734000-56734800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr3:56734000-56734800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr3:56734000-56734800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr3:56734000-56734800	Enhancers	HMEC	breast
23	chr3:56734000-56734800	Enhancers	NHEK	skin

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