Variant report

Variant	rs541206046
Chromosome Location	chr14:65601888-65601889
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv1833060	chr14:65594460-65607642	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	esv989058	chr14:65601785-65607798	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65596800-65602600	Enhancers	Fetal Intestine Small	intestine
2	chr14:65597800-65602600	Enhancers	Fetal Intestine Large	intestine
3	chr14:65598200-65602200	Enhancers	Rectal Mucosa Donor 31	rectum
4	chr14:65598800-65604400	Weak transcription	Colonic Mucosa	Colon
5	chr14:65598800-65604400	Weak transcription	Osteobl	bone
6	chr14:65599200-65602000	Enhancers	HepG2	liver
7	chr14:65601400-65602000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr14:65601400-65602400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr14:65601400-65602400	Enhancers	Rectal Mucosa Donor 29	rectum
10	chr14:65601600-65602000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
11	chr14:65601600-65602200	Enhancers	Primary T cells fromperipheralblood	blood
12	chr14:65601600-65602200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:65601600-65602400	Enhancers	Fetal Thymus	thymus
14	chr14:65601600-65602400	Enhancers	Dnd41	blood
15	chr14:65601600-65605400	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr14:65601800-65602000	Enhancers	HMEC	breast
17	chr14:65601800-65602200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr14:65601800-65602200	Enhancers	Thymus	Thymus
19	chr14:65601800-65602200	Enhancers	NHEK	skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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