Variant report

Variant	rs541359526
Chromosome Location	chr13:37680257-37680258
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv826612	chr13:37678673-37680292	ZNF genes & repeats Weak transcription Enhancers Strong transcription	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
3	esv12579	chr13:37679949-37681397	Enhancers Weak transcription Strong transcription	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37673600-37680800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr13:37677000-37680400	Weak transcription	Colon Smooth Muscle	Colon
3	chr13:37677200-37680400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr13:37677200-37680400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr13:37677400-37680600	Weak transcription	HSMMtube	muscle
6	chr13:37677800-37682200	Strong transcription	Primary neutrophils fromperipheralblood	blood
7	chr13:37678600-37680400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr13:37679800-37681800	Weak transcription	Spleen	Spleen
9	chr13:37679800-37682800	Weak transcription	Fetal Stomach	stomach
10	chr13:37680200-37681600	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr13:37680200-37682000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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