Variant report

Variant	rs541392926
Chromosome Location	chr7:27170637-27170638
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	USF1	chr7:27170459-27170708	A549	lung:	n/a	n/a
2	PML	chr7:27170241-27171078	MCF-7	breast:	n/a	n/a
3	POLR2A	chr7:27170520-27170816	Hela-S3	cervix:	n/a	n/a
4	POLR2A	chr7:27170471-27170937	Hela-S3	cervix:	n/a	n/a
5	ELF1	chr7:27170248-27171167	MCF-7	breast:	n/a	n/a
6	E2F6	chr7:27170400-27171127	H1-hESC	embryonic stem cell:	n/a	n/a
7	MAZ	chr7:27169576-27170828	HepG2	liver:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
8	TAF1	chr7:27169551-27170999	HepG2	liver:	n/a	n/a
9	E2F6	chr7:27170359-27171047	H1-hESC	embryonic stem cell:	n/a	n/a
10	NR3C1	chr7:27170263-27170755	A549	lung:	n/a	n/a
11	MAX	chr7:27170259-27171131	NB4	blood:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
12	BHLHE40	chr7:27170273-27170880	HepG2	liver:	n/a	n/a
13	NR3C1	chr7:27170331-27170688	A549	lung:	n/a	n/a
14	USF1	chr7:27170300-27171154	HCT-116	colon:	n/a	n/a
15	POLR2A	chr7:27170388-27170925	HepG2	liver:	n/a	n/a
16	POLR2A	chr7:27169922-27171303	MCF10A-Er-Src	breast:	n/a	n/a
17	ZNF143	chr7:27170308-27171004	H1-hESC	embryonic stem cell:	n/a	chr7:27170536-27170554 chr7:27170576-27170586
18	USF1	chr7:27170425-27170795	SK-N-SH_RA	brain:	n/a	n/a
19	MYC	chr7:27170451-27170641	MCF10A-Er-Src	breast:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
20	USF1	chr7:27170332-27170809	A549	lung:	n/a	n/a
21	ATF3	chr7:27170355-27170818	H1-hESC	embryonic stem cell:	n/a	chr7:27170556-27170565 chr7:27170549-27170558
22	USF1	chr7:27170215-27171037	HCT-116	colon:	n/a	n/a
23	MAX	chr7:27170428-27170726	A549	lung:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
24	POLR2A	chr7:27170447-27170830	HepG2	liver:	n/a	n/a
25	SP1	chr7:27170160-27170913	A549	lung:	n/a	chr7:27170671-27170685 chr7:27170554-27170566 chr7:27170555-27170564 chr7:27170693-27170707 chr7:27170555-27170564 chr7:27170556-27170565 chr7:27170464-27170475 chr7:27170665-27170679 chr7:27170415-27170426 chr7:27170554-27170566 chr7:27170555-27170569
26	MAX	chr7:27170213-27171081	H1-hESC	embryonic stem cell:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
27	ELF1	chr7:27170201-27171108	HCT-116	colon:	n/a	n/a
28	TBP	chr7:27170592-27170850	HepG2	liver:	n/a	n/a
29	HA-E2F1	chr7:27169989-27171216	MCF-7	breast:	n/a	n/a
30	JUND	chr7:27170376-27170714	HepG2	liver:	n/a	n/a
31	YY1	chr7:27169663-27170913	HepG2	liver:	n/a	chr7:27170691-27170702
32	POLR2A	chr7:27170407-27170913	ECC-1	luminal epithelium:	n/a	n/a
33	FOS	chr7:27170444-27170706	MCF10A-Er-Src	breast:	n/a	n/a
34	SP1	chr7:27170213-27170676	H1-hESC	embryonic stem cell:	n/a	chr7:27170554-27170566 chr7:27170555-27170564 chr7:27170555-27170564 chr7:27170556-27170565 chr7:27170464-27170475 chr7:27170415-27170426 chr7:27170554-27170566 chr7:27170555-27170569
35	POLR2A	chr7:27169633-27171106	MCF-7	breast:	n/a	n/a
36	ATF3	chr7:27170360-27170771	GM12878	blood:	n/a	chr7:27170556-27170565 chr7:27170549-27170558
37	MYC	chr7:27170364-27170727	HepG2	liver:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
38	HEY1	chr7:27169626-27170942	HepG2	liver:	n/a	chr7:27170546-27170561
39	ELF1	chr7:27170468-27170873	SK-N-SH	brain:	n/a	n/a
40	JUND	chr7:27170340-27170642	H1-hESC	embryonic stem cell:	n/a	n/a
41	POLR2A	chr7:27170478-27170850	A549	lung:	n/a	n/a
42	POLR2A	chr7:27170229-27171001	U87	brain:	n/a	n/a
43	SP1	chr7:27170201-27170883	H1-hESC	embryonic stem cell:	n/a	chr7:27170671-27170685 chr7:27170554-27170566 chr7:27170555-27170564 chr7:27170693-27170707 chr7:27170555-27170564 chr7:27170556-27170565 chr7:27170464-27170475 chr7:27170665-27170679 chr7:27170415-27170426 chr7:27170554-27170566 chr7:27170555-27170569
44	FOS	chr7:27170487-27170707	MCF10A-Er-Src	breast:	n/a	n/a
45	MAZ	chr7:27169186-27171474	IMR90	lung:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
46	E2F4	chr7:27170351-27170907	MCF10A-Er-Src	breast:	n/a	n/a
47	CREB1	chr7:27170419-27170834	A549	lung:	n/a	n/a
48	MYC	chr7:27170358-27170937	MCF-7	breast:	n/a	chr7:27170570-27170577 chr7:27170567-27170576
49	CHD2	chr7:27170224-27170858	HepG2	liver:	n/a	chr7:27170554-27170564
50	POLR2A	chr7:27170489-27170809	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:26902547..26905705-chr7:27166224..27172586,14	MCF-7	breast:
2	chr7:27154191..27156761-chr7:27169805..27172339,2	MCF-7	breast:
3	chr7:27163696..27168800-chr7:27169622..27172644,4	K562	blood:
4	chr7:27164893..27167743-chr7:27169622..27171494,2	K562	blood:
5	chr7:27169441..27172151-chr7:27190133..27191991,3	MCF-7	breast:
6	chr3:186284854..186285731-chr7:27170175..27170751,2	NB4	blood:
7	chr7:27170268..27172208-chr7:27181167..27182998,2	MCF-7	breast:
8	chr7:27161653..27164579-chr7:27169154..27171048,2	MCF-7	breast:
9	chr7:26894678..26896550-chr7:27170054..27174548,4	MCF-7	breast:
10	chr7:26897524..26906359-chr7:27169396..27177834,18	MCF-7	breast:
11	chr7:26903161..26904431-chr7:27170079..27171250,4	MCF-7	breast:

Variant related genes	Relation type
HOXA3	TF binding region
HOXA4	TF binding region
ENSG00000113838	Chromatin interaction
ENSG00000105997	Chromatin interaction
ENSG00000090520	Chromatin interaction
ENSG00000106004	Chromatin interaction
ENSG00000005020	Chromatin interaction
ENSG00000253552	Chromatin interaction
ENSG00000106006	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887858	chr7:27127231-27188659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
11	nsv887860	chr7:27127231-27196069	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv887859	chr7:27127231-27196113	Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
13	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
14	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
18	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
19	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
21	nsv606463	chr7:27135314-27182245	Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
22	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
24	nsv887871	chr7:27136308-27179814	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
25	nsv887872	chr7:27136308-27181437	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
26	nsv887873	chr7:27136308-27186495	Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
27	nsv887874	chr7:27136308-27196069	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
28	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
29	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
30	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
31	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
32	nsv606466	chr7:27145024-27197319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
33	nsv606467	chr7:27145100-27196113	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
34	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
35	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
36	nsv5674	chr7:27152562-27197341	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
37	esv3386669	chr7:27168427-27171725	Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
38	nsv887876	chr7:27168858-27196069	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
39	esv3428881	chr7:27169177-27171225	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
40	nsv824042	chr7:27169231-27247232	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
41	nsv887877	chr7:27169388-27217359	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	115 gene(s)	inside rSNPs	diseases
42	esv1824277	chr7:27169934-27176966	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27167800-27171000	Active TSS	Duodenum Smooth Muscle	Duodenum
2	chr7:27168800-27170800	Active TSS	Esophagus	oesophagus
3	chr7:27168800-27170800	Active TSS	Lung	lung
4	chr7:27168800-27171400	Active TSS	Fetal Kidney	kidney
5	chr7:27168800-27171800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
6	chr7:27169000-27170800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
7	chr7:27169000-27170800	Bivalent/Poised TSS	Fetal Lung	lung
8	chr7:27169000-27171200	Active TSS	Aorta	Aorta
9	chr7:27169000-27171400	Active TSS	Right Atrium	heart
10	chr7:27169200-27170800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr7:27169200-27170800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr7:27169200-27170800	Active TSS	Breast Myoepithelial Primary Cells	Breast
13	chr7:27169200-27170800	Active TSS	Fetal Stomach	stomach
14	chr7:27169200-27170800	Active TSS	HSMM	muscle
15	chr7:27169200-27170800	Bivalent/Poised TSS	NH-A	brain
16	chr7:27169200-27170800	Active TSS	NHDF-Ad	bronchial
17	chr7:27169400-27170800	Active TSS	Colon Smooth Muscle	Colon
18	chr7:27169400-27170800	Active TSS	Duodenum Mucosa	Duodenum
19	chr7:27169400-27170800	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
20	chr7:27169400-27170800	Bivalent/Poised TSS	Placenta Amnion	Placenta Amnion
21	chr7:27169400-27171000	Active TSS	Psoas Muscle	Psoas
22	chr7:27169400-27171000	Active TSS	HSMMtube	muscle
23	chr7:27169400-27171200	Active TSS	A549	lung
24	chr7:27169600-27170800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr7:27169600-27170800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
26	chr7:27169600-27170800	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
27	chr7:27169600-27170800	Active TSS	Fetal Intestine Large	intestine
28	chr7:27169600-27170800	Active TSS	Gastric	stomach
29	chr7:27169600-27170800	Bivalent/Poised TSS	Left Ventricle	heart
30	chr7:27169600-27170800	Active TSS	Small Intestine	intestine
31	chr7:27169600-27170800	Active TSS	Stomach Smooth Muscle	stomach
32	chr7:27169600-27170800	Active TSS	HepG2	liver
33	chr7:27169600-27170800	Active TSS	NHEK	skin
34	chr7:27169600-27171000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr7:27169600-27171000	Active TSS	Rectal Smooth Muscle	rectum
36	chr7:27169600-27171000	Active TSS	Thymus	Thymus
37	chr7:27169600-27171200	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr7:27169800-27170800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr7:27169800-27170800	Active TSS	Primary neutrophils fromperipheralblood	blood
40	chr7:27169800-27170800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr7:27169800-27170800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr7:27169800-27170800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr7:27169800-27170800	Active TSS	Adipose Nuclei	Adipose
44	chr7:27169800-27170800	Bivalent/Poised TSS	Fetal Thymus	thymus
45	chr7:27169800-27170800	Active TSS	Rectal Mucosa Donor 31	rectum
46	chr7:27169800-27170800	Active TSS	Skeletal Muscle Male	skeletal muscle
47	chr7:27169800-27170800	Active TSS	NHLF	lung
48	chr7:27169800-27171000	Active TSS	Sigmoid Colon	Sigmoid Colon
49	chr7:27169800-27171000	Active TSS	Spleen	Spleen
50	chr7:27169800-27171000	Active TSS	Hela-S3	cervix

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