Variant report

Variant	rs541518517
Chromosome Location	chr12:10309608-10309609
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898757	chr12:10229281-10614641	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv898758	chr12:10309477-10318497	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10306400-10313400	Weak transcription	Hela-S3	cervix
2	chr12:10307000-10311400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr12:10307000-10312400	Weak transcription	Placenta	Placenta
4	chr12:10307000-10312800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr12:10307000-10313400	Weak transcription	Brain Anterior Caudate	brain
6	chr12:10307000-10318600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr12:10307000-10319800	Weak transcription	Right Atrium	heart
8	chr12:10307200-10311000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr12:10307200-10311200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr12:10307200-10311400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr12:10307400-10311400	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr12:10309000-10311400	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr12:10309000-10311600	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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