Variant report

Variant rs541521087
Chromosome Location chr22:30598842-30598843
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30592000-30601400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr22:30592800-30602800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr22:30592800-30604800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr22:30593200-30600600 Weak transcription Spleen Spleen
5 chr22:30593600-30600800 Weak transcription Small Intestine intestine
6 chr22:30593600-30603000 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr22:30593800-30600400 Weak transcription Osteobl bone
8 chr22:30595000-30600400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr22:30595600-30600800 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr22:30597600-30603000 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr22:30597600-30609800 Enhancers Stomach Mucosa stomach
12 chr22:30597600-30610000 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr22:30597800-30599000 Enhancers Muscle Satellite Cultured Cells --
14 chr22:30597800-30599000 Enhancers Fetal Kidney kidney
15 chr22:30597800-30599000 Bivalent Enhancer Fetal Muscle Leg muscle
16 chr22:30597800-30599000 ZNF genes & repeats NHEK skin
17 chr22:30597800-30599200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr22:30597800-30599200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr22:30597800-30599200 Enhancers Fetal Stomach stomach
20 chr22:30597800-30599600 Enhancers Fetal Lung lung
21 chr22:30597800-30601200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr22:30597800-30601200 Enhancers HSMM muscle
23 chr22:30597800-30601200 Enhancers NHDF-Ad bronchial
24 chr22:30597800-30602400 Enhancers Duodenum Mucosa Duodenum
25 chr22:30598000-30599000 Enhancers Ovary ovary
26 chr22:30598000-30599200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr22:30598000-30599200 Bivalent Enhancer Fetal Muscle Trunk muscle
28 chr22:30598000-30599600 Enhancers Rectal Mucosa Donor 31 rectum
29 chr22:30598200-30599000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr22:30598200-30599000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr22:30598200-30599200 Enhancers Fetal Intestine Small intestine
32 chr22:30598200-30599200 Enhancers Fetal Thymus thymus
33 chr22:30598200-30599400 Enhancers HSMMtube muscle
34 chr22:30598200-30600000 Enhancers Pancreas Pancrea
35 chr22:30598200-30600400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr22:30598200-30601800 Enhancers Esophagus oesophagus
37 chr22:30598400-30599200 Enhancers Fetal Intestine Large intestine
38 chr22:30598400-30599400 Weak transcription Gastric stomach
39 chr22:30598400-30601800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr22:30598600-30599000 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr22:30598600-30599000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr22:30598600-30599000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr22:30598600-30599000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr22:30598600-30599000 Enhancers HUES6 Cell Line embryonic stem cell
45 chr22:30598600-30599000 Enhancers Cortex derived primary cultured neurospheres brain
46 chr22:30598600-30599000 Active TSS Rectal Mucosa Donor 29 rectum
47 chr22:30598600-30599000 Enhancers Sigmoid Colon Sigmoid Colon
48 chr22:30598600-30599000 Enhancers A549 lung
49 chr22:30598600-30599800 Enhancers Lung lung
50 chr22:30598600-30601400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links