The 2.0 version of rSNPBase

Variant report

Variant rs541587187
Chromosome Location chr16:65138377-65138378
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:65095800-65152000 Weak transcription Fetal Intestine Large intestine
2 chr16:65106200-65147400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr16:65106400-65147600 Weak transcription Fetal Muscle Trunk muscle
4 chr16:65106800-65151800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr16:65113200-65141600 Weak transcription Stomach Smooth Muscle stomach
6 chr16:65113600-65138800 Weak transcription Fetal Muscle Leg muscle
7 chr16:65113800-65140400 Weak transcription Fetal Brain Male brain
8 chr16:65115800-65147600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr16:65117400-65141000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr16:65118400-65138400 Weak transcription Fetal Stomach stomach
11 chr16:65120800-65148600 Weak transcription Aorta Aorta
12 chr16:65122200-65147400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr16:65124400-65139200 Weak transcription NHLF lung
14 chr16:65126600-65140800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr16:65129200-65148400 Weak transcription Fetal Kidney kidney
16 chr16:65130200-65147400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr16:65132600-65139400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr16:65133600-65141800 Weak transcription Muscle Satellite Cultured Cells --
19 chr16:65133800-65139000 Weak transcription HSMMtube muscle
20 chr16:65133800-65139800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr16:65134200-65140800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr16:65134200-65148600 Weak transcription HMEC breast
23 chr16:65135400-65139600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr16:65135400-65143600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr16:65135800-65138400 Weak transcription Brain Hippocampus Middle brain
26 chr16:65136800-65141600 Weak transcription NH-A brain
27 chr16:65136800-65144600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr16:65137000-65138400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr16:65137000-65141800 Weak transcription Spleen Spleen
30 chr16:65137000-65147400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr16:65137200-65138400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr16:65137200-65138400 Weak transcription Osteobl bone
33 chr16:65137200-65139200 Weak transcription NHDF-Ad bronchial
34 chr16:65137200-65139600 Weak transcription HSMM muscle
35 chr16:65137200-65141600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr16:65138000-65138400 Enhancers Fetal Lung lung
37 chr16:65138000-65139200 Enhancers Ovary ovary
38 chr16:65138200-65142200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015