The 2.0 version of rSNPBase

Variant report

Variant rs541612639
Chromosome Location chr7:129379454-129379455
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129319000-129380000 Weak transcription NHDF-Ad bronchial
2 chr7:129339200-129381800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr7:129343200-129379600 Weak transcription Stomach Mucosa stomach
4 chr7:129348200-129392000 Strong transcription Primary T helper cells fromperipheralblood blood
5 chr7:129351600-129394800 Weak transcription Hela-S3 cervix
6 chr7:129355200-129380600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr7:129357000-129392400 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr7:129360600-129394800 Weak transcription Small Intestine intestine
9 chr7:129361800-129392400 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr7:129362200-129380600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr7:129362200-129381200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr7:129362200-129387800 Strong transcription Liver Liver
13 chr7:129364200-129397600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr7:129365200-129388400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr7:129366800-129399400 Weak transcription Fetal Kidney kidney
16 chr7:129369200-129380600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr7:129369400-129379600 Weak transcription Right Atrium heart
18 chr7:129369600-129380400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr7:129369600-129399400 Weak transcription Fetal Brain Male brain
20 chr7:129372000-129381000 Weak transcription H9 Cell Line embryonic stem cell
21 chr7:129372000-129383400 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr7:129372000-129390000 Weak transcription HMEC breast
23 chr7:129372200-129381000 Weak transcription HepG2 liver
24 chr7:129372200-129381600 Weak transcription Fetal Brain Female brain
25 chr7:129372200-129387000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr7:129372200-129390000 Weak transcription NHEK skin
27 chr7:129372200-129397800 Weak transcription NH-A brain
28 chr7:129372400-129398800 Weak transcription NHLF lung
29 chr7:129373200-129381000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr7:129373400-129389200 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr7:129373600-129381000 Strong transcription Fetal Muscle Trunk muscle
32 chr7:129373600-129385600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr7:129373800-129385200 Strong transcription Duodenum Mucosa Duodenum
34 chr7:129373800-129392000 Strong transcription Primary monocytes fromperipheralblood blood
35 chr7:129374400-129380800 Weak transcription Osteobl bone
36 chr7:129374600-129394800 Weak transcription Gastric stomach
37 chr7:129374800-129386600 Weak transcription Esophagus oesophagus
38 chr7:129374800-129390000 Weak transcription Colonic Mucosa Colon
39 chr7:129375000-129379600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr7:129375000-129379600 Weak transcription HSMMtube muscle
41 chr7:129375000-129381400 Strong transcription Primary neutrophils fromperipheralblood blood
42 chr7:129375000-129386600 Weak transcription GM12878-XiMat blood
43 chr7:129375000-129390000 Weak transcription Placenta Amnion Placenta Amnion
44 chr7:129375000-129391600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr7:129375000-129394800 Weak transcription Muscle Satellite Cultured Cells --
46 chr7:129375000-129395400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr7:129375200-129380000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr7:129375400-129379600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr7:129375600-129379600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr7:129375600-129381400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015