Variant report

Variant	rs541710213
Chromosome Location	chr14:78222087-78222088
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:78222067..78225484-chr14:78225871..78228638,3	K562	blood:
2	chr14:78221316..78225180-chr14:78225446..78228735,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000268208	Chromatin interaction
ENSG00000197734	Chromatin interaction
ENSG00000100603	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758362	chr14:78074180-78262572	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
2	esv2759998	chr14:78074180-78262572	Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
3	esv34940	chr14:78104897-78222798	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
4	nsv1043788	chr14:78178490-78381190	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
5	esv3369630	chr14:78221823-78222250	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78176200-78224000	Strong transcription	Primary monocytes fromperipheralblood	blood
2	chr14:78176200-78225400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr14:78176400-78223400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
4	chr14:78176400-78224200	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr14:78176600-78223200	Strong transcription	Fetal Muscle Leg	muscle
6	chr14:78176600-78224200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr14:78176800-78222200	Strong transcription	HUES6 Cell Line	embryonic stem cell
8	chr14:78177000-78222600	Strong transcription	HUES64 Cell Line	embryonic stem cell
9	chr14:78177000-78224200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr14:78177200-78223800	Strong transcription	Dnd41	blood
11	chr14:78177400-78222400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr14:78199000-78225200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr14:78199600-78225000	Weak transcription	Fetal Heart	heart
14	chr14:78201600-78226600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
15	chr14:78207400-78223000	Strong transcription	Fetal Thymus	thymus
16	chr14:78207600-78222400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr14:78207600-78224800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
18	chr14:78207600-78225400	Strong transcription	Placenta	Placenta
19	chr14:78209800-78223000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr14:78210000-78223800	Strong transcription	Sigmoid Colon	Sigmoid Colon
21	chr14:78210600-78222800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr14:78211400-78223400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr14:78211400-78223800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr14:78212800-78222800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr14:78212800-78225600	Weak transcription	Stomach Mucosa	stomach
26	chr14:78214000-78223000	Strong transcription	Fetal Lung	lung
27	chr14:78214200-78222800	Strong transcription	Primary T cells from cord blood	blood
28	chr14:78214200-78226600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr14:78214400-78223600	Strong transcription	Duodenum Mucosa	Duodenum
30	chr14:78215000-78222800	Strong transcription	Fetal Intestine Large	intestine
31	chr14:78215200-78223400	Strong transcription	Fetal Muscle Trunk	muscle
32	chr14:78215400-78223800	Strong transcription	Primary B cells from cord blood	blood
33	chr14:78215600-78223000	Strong transcription	Fetal Brain Female	brain
34	chr14:78216200-78223800	Weak transcription	Colon Smooth Muscle	Colon
35	chr14:78216400-78225000	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr14:78216400-78225400	Weak transcription	Esophagus	oesophagus
37	chr14:78216600-78222200	Weak transcription	Psoas Muscle	Psoas
38	chr14:78216600-78224800	Weak transcription	Pancreas	Pancrea
39	chr14:78216800-78225200	Weak transcription	NHLF	lung
40	chr14:78217000-78225000	Weak transcription	HSMMtube	muscle
41	chr14:78217000-78226600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr14:78217400-78224800	Weak transcription	Brain Substantia Nigra	brain
43	chr14:78217600-78225200	Weak transcription	Gastric	stomach
44	chr14:78217600-78225200	Weak transcription	Spleen	Spleen
45	chr14:78217600-78225400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr14:78217800-78225200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr14:78217800-78225200	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr14:78218000-78222600	Weak transcription	Right Atrium	heart
49	chr14:78218000-78225200	Weak transcription	Brain Angular Gyrus	brain
50	chr14:78218000-78226400	Weak transcription	Aorta	Aorta

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