Variant report
| Variant | rs541789899 |
|---|---|
| Chromosome Location | chr5:115893563-115893564 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:115880800-115900600 | Weak transcription | Fetal Kidney | kidney |
| 2 | chr5:115882600-115895400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 3 | chr5:115885400-115894000 | Genic enhancers | HUES64 Cell Line | embryonic stem cell |
| 4 | chr5:115885400-115894600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 5 | chr5:115885800-115893600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 6 | chr5:115886600-115901000 | Weak transcription | Placenta | Placenta |
| 7 | chr5:115887400-115895000 | Weak transcription | Lung | lung |
| 8 | chr5:115887400-115897000 | Weak transcription | Small Intestine | intestine |
| 9 | chr5:115888400-115893800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 10 | chr5:115889000-115895200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 11 | chr5:115889200-115893600 | Enhancers | Brain Substantia Nigra | brain |
| 12 | chr5:115889400-115895000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 13 | chr5:115889400-115899400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 14 | chr5:115889600-115895400 | Weak transcription | Fetal Brain Female | brain |
| 15 | chr5:115889600-115898400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 16 | chr5:115890000-115900800 | Enhancers | Brain Hippocampus Middle | brain |
| 17 | chr5:115890400-115893600 | Enhancers | HepG2 | liver |
| 18 | chr5:115890600-115893800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr5:115890600-115907800 | Weak transcription | Spleen | Spleen |
| 20 | chr5:115890800-115894800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 21 | chr5:115890800-115894800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr5:115890800-115894800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 23 | chr5:115890800-115895000 | Weak transcription | Left Ventricle | heart |
| 24 | chr5:115890800-115895600 | Weak transcription | Pancreas | Pancrea |
| 25 | chr5:115890800-115895800 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr5:115890800-115898800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 27 | chr5:115890800-115907600 | Weak transcription | Colonic Mucosa | Colon |
| 28 | chr5:115891000-115894200 | Enhancers | Brain Anterior Caudate | brain |
| 29 | chr5:115891000-115894600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 30 | chr5:115891000-115894600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 31 | chr5:115891000-115894600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 32 | chr5:115891000-115895800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 33 | chr5:115891000-115898200 | Weak transcription | Right Atrium | heart |
| 34 | chr5:115891000-115900600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 35 | chr5:115891000-115907600 | Weak transcription | Ovary | ovary |
| 36 | chr5:115891200-115904600 | Weak transcription | Fetal Stomach | stomach |
| 37 | chr5:115891400-115895400 | Weak transcription | Psoas Muscle | Psoas |
| 38 | chr5:115891400-115905200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr5:115891800-115894600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 40 | chr5:115891800-115894800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 41 | chr5:115892000-115894800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 42 | chr5:115892600-115894400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 43 | chr5:115892600-115894800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 44 | chr5:115893000-115893600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 45 | chr5:115893000-115893600 | Enhancers | Fetal Intestine Large | intestine |
| 46 | chr5:115893000-115893800 | Flanking Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 47 | chr5:115893000-115894800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 48 | chr5:115893000-115894800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 49 | chr5:115893000-115894800 | Weak transcription | Fetal Intestine Small | intestine |
| 50 | chr5:115893200-115893800 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
