Variant report

Variant	rs541797709
Chromosome Location	chr13:95161070-95161071
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34004	chr13:94906537-95392644	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv976069	chr13:95160348-95162152	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95159000-95161200	Enhancers	Primary T helper cells fromperipheralblood	blood
2	chr13:95159200-95161200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
3	chr13:95159600-95161800	Enhancers	Dnd41	blood
4	chr13:95160600-95161200	Bivalent Enhancer	Fetal Thymus	thymus
5	chr13:95160600-95161200	Bivalent Enhancer	Thymus	Thymus
6	chr13:95160600-95161800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:95161000-95161400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr13:95161000-95161400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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