The 2.0 version of rSNPBase

Variant report

Variant rs541858005
Chromosome Location chr6:37340160-37340161
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37323000-37351400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:37323400-37349800 Weak transcription Placenta Amnion Placenta Amnion
3 chr6:37323400-37356800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:37324000-37366800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr6:37328000-37360800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr6:37328000-37361800 Strong transcription Dnd41 blood
7 chr6:37328600-37361200 Strong transcription Primary T cells fromperipheralblood blood
8 chr6:37334000-37340400 Strong transcription Hela-S3 cervix
9 chr6:37334400-37363200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr6:37334600-37352600 Strong transcription Primary T cells from cord blood blood
11 chr6:37334600-37352600 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr6:37334600-37353000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr6:37334800-37340800 Strong transcription Primary B cells from cord blood blood
14 chr6:37335000-37341600 Strong transcription Fetal Stomach stomach
15 chr6:37335400-37352400 Strong transcription Fetal Adrenal Gland Adrenal Gland
16 chr6:37335600-37340200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:37335600-37340200 Strong transcription Fetal Intestine Large intestine
18 chr6:37335600-37340600 Strong transcription Adipose Nuclei Adipose
19 chr6:37335600-37343800 Strong transcription Fetal Thymus thymus
20 chr6:37335600-37345000 Strong transcription H1 Cell Line embryonic stem cell
21 chr6:37335600-37351600 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr6:37335800-37340400 Strong transcription Duodenum Smooth Muscle Duodenum
23 chr6:37335800-37340800 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr6:37335800-37347400 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr6:37335800-37348200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr6:37336000-37351600 Strong transcription Stomach Smooth Muscle stomach
27 chr6:37336200-37340400 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr6:37337000-37340200 Strong transcription K562 blood
29 chr6:37337000-37348800 Weak transcription NHDF-Ad bronchial
30 chr6:37337200-37340200 Strong transcription Liver Liver
31 chr6:37337200-37353000 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr6:37337400-37340200 Strong transcription Primary B cells from peripheral blood blood
33 chr6:37337400-37340200 Strong transcription GM12878-XiMat blood
34 chr6:37337400-37340600 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr6:37337400-37357000 Weak transcription Stomach Mucosa stomach
36 chr6:37337400-37362600 Weak transcription Psoas Muscle Psoas
37 chr6:37337600-37340400 Strong transcription Primary hematopoietic stem cells blood
38 chr6:37337600-37341000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:37337600-37342200 Weak transcription Rectal Smooth Muscle rectum
40 chr6:37337600-37352000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr6:37337600-37354000 Weak transcription Right Ventricle heart
42 chr6:37337600-37361000 Strong transcription Primary monocytes fromperipheralblood blood
43 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr6:37337600-37363200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr6:37337800-37340600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:37337800-37341600 Weak transcription Fetal Lung lung
47 chr6:37337800-37342400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr6:37337800-37345200 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr6:37337800-37353000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:37338000-37344200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015