| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv529328 |
chr12:29692414-30246209 |
Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv948495 |
chr12:30090771-30344772 |
ZNF genes & repeats Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1042081 |
chr12:30147993-30344670 |
Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv541436 |
chr12:30147993-30344670 |
Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv557977 |
chr12:30224990-30241143 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv557978 |
chr12:30228188-30241143 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv557979 |
chr12:30228467-30241143 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv557980 |
chr12:30229583-30243473 |
Weak transcription Enhancers Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv557981 |
chr12:30229606-30243473 |
Enhancers Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015