The 2.0 version of rSNPBase

Variant report

Variant rs541875588
Chromosome Location chr9:100110197-100110198
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
2 chr9:100077000-100140800 Weak transcription Fetal Brain Male brain
3 chr9:100080400-100126400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr9:100083800-100124000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr9:100086400-100110400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr9:100086600-100121600 Weak transcription Right Ventricle heart
7 chr9:100086600-100132000 Weak transcription Thymus Thymus
8 chr9:100088000-100126200 Weak transcription Primary B cells from peripheral blood blood
9 chr9:100088200-100127000 Weak transcription Duodenum Mucosa Duodenum
10 chr9:100088600-100128600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr9:100088600-100132800 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr9:100088800-100121400 Weak transcription Gastric stomach
13 chr9:100089200-100128200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr9:100090600-100119000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr9:100090600-100133800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr9:100091600-100149200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr9:100093000-100111000 Weak transcription Brain Cingulate Gyrus brain
18 chr9:100093000-100117000 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr9:100093600-100122400 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr9:100095600-100116800 Weak transcription Brain Hippocampus Middle brain
21 chr9:100099000-100132200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr9:100104400-100117000 Weak transcription Colon Smooth Muscle Colon
23 chr9:100104400-100118800 Weak transcription Spleen Spleen
24 chr9:100104400-100142000 Weak transcription Rectal Smooth Muscle rectum
25 chr9:100104600-100110400 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr9:100104600-100111000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr9:100104600-100118200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr9:100104600-100128200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr9:100104800-100116800 Weak transcription Fetal Intestine Large intestine
30 chr9:100105000-100111600 Weak transcription Fetal Intestine Small intestine
31 chr9:100105200-100111000 Weak transcription Lung lung
32 chr9:100105200-100120800 Weak transcription Psoas Muscle Psoas
33 chr9:100105400-100127600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr9:100105800-100128000 Weak transcription Brain Substantia Nigra brain
35 chr9:100106400-100110200 Strong transcription Primary T cells fromperipheralblood blood
36 chr9:100106400-100118000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr9:100106800-100117200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr9:100106800-100128000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr9:100106800-100143200 Weak transcription Liver Liver
40 chr9:100107000-100117000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr9:100107000-100131400 Weak transcription Primary hematopoietic stem cells blood
42 chr9:100107200-100112000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr9:100107200-100115600 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr9:100107200-100117000 Weak transcription Left Ventricle heart
45 chr9:100107200-100130200 Weak transcription Fetal Lung lung
46 chr9:100107200-100138400 Weak transcription Placenta Amnion Placenta Amnion
47 chr9:100107800-100117200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr9:100108000-100148200 Weak transcription Esophagus oesophagus
49 chr9:100108800-100110800 Weak transcription Fetal Brain Female brain
50 chr9:100108800-100113400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015