Variant report

Variant	rs541896455
Chromosome Location	chr4:79672302-79672303
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803379	chr4:79661618-79704210	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv1792021	chr4:79661618-79784245	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
3	esv2424456	chr4:79671998-79673585	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:79669400-79675400	Enhancers	Primary B cells from peripheral blood	blood
2	chr4:79669800-79672600	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr4:79670200-79675400	Enhancers	Primary B cells from cord blood	blood
4	chr4:79670600-79672400	Enhancers	Primary hematopoietic stem cells	blood
5	chr4:79671200-79673400	Enhancers	Fetal Intestine Small	intestine
6	chr4:79671600-79672400	Enhancers	Small Intestine	intestine
7	chr4:79671600-79673800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr4:79671600-79674600	Enhancers	NHDF-Ad	bronchial
9	chr4:79671800-79672800	Enhancers	Fetal Intestine Large	intestine
10	chr4:79671800-79673200	Enhancers	Liver	Liver
11	chr4:79671800-79673600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr4:79671800-79682600	Weak transcription	K562	blood
13	chr4:79672000-79672400	Enhancers	GM12878-XiMat	blood
14	chr4:79672000-79672800	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr4:79672200-79672600	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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