Variant report

Variant	rs541919039
Chromosome Location	chr3:146386810-146386811
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:41 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516386	chr3:146366513-146758405	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv4047	chr3:146368154-146401858	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3369526	chr3:146374303-146400737	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv591937	chr3:146375764-146390316	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
5	nsv508254	chr3:146379951-146386956	Enhancers	n/a	n/a	inside rSNPs	n/a
6	esv1824574	chr3:146381657-146390316	Enhancers	n/a	n/a	inside rSNPs	n/a
7	nsv591938	chr3:146381657-146390316	Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv1821528	chr3:146381657-146390895	Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv1817157	chr3:146381657-146391374	Enhancers	n/a	n/a	inside rSNPs	n/a
10	esv1819851	chr3:146381657-146391374	Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv1823100	chr3:146381657-146391374	Enhancers	n/a	n/a	inside rSNPs	n/a
12	nsv435753	chr3:146382221-146391153	Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv988809	chr3:146382812-146390985	Enhancers	n/a	n/a	inside rSNPs	n/a
14	esv3461200	chr3:146383262-146392360	Enhancers	n/a	n/a	inside rSNPs	n/a
15	esv2643552	chr3:146383929-146392706	Enhancers	n/a	n/a	inside rSNPs	n/a
16	esv3428505	chr3:146384012-146391510	Enhancers	n/a	n/a	inside rSNPs	n/a
17	esv3461196	chr3:146384087-146391635	Enhancers	n/a	n/a	inside rSNPs	n/a
18	nsv513086	chr3:146384215-146390495	Enhancers	n/a	n/a	inside rSNPs	n/a
19	esv3508708	chr3:146384437-146391410	Enhancers	n/a	n/a	inside rSNPs	n/a
20	esv3508709	chr3:146384437-146391410	Enhancers	n/a	n/a	inside rSNPs	n/a
21	nsv436383	chr3:146384641-146390650	Enhancers	n/a	n/a	inside rSNPs	n/a
22	esv3461199	chr3:146384751-146390768	Enhancers	n/a	n/a	inside rSNPs	n/a
23	esv3461201	chr3:146384912-146390768	Enhancers	n/a	n/a	inside rSNPs	n/a
24	esv3461198	chr3:146384912-146390910	Enhancers	n/a	n/a	inside rSNPs	n/a
25	esv3418082	chr3:146384972-146390677	Enhancers	n/a	n/a	inside rSNPs	n/a
26	esv3464115	chr3:146385054-146394957	Enhancers	n/a	n/a	inside rSNPs	n/a
27	esv3515352	chr3:146385072-146395000	Enhancers	n/a	n/a	inside rSNPs	n/a
28	nsv591939	chr3:146385081-146392596	Enhancers	n/a	n/a	inside rSNPs	n/a
29	esv3515354	chr3:146385087-146394966	Enhancers	n/a	n/a	inside rSNPs	n/a
30	esv3464113	chr3:146385117-146394952	Enhancers	n/a	n/a	inside rSNPs	n/a
31	esv3515355	chr3:146385130-146394911	Enhancers	n/a	n/a	inside rSNPs	n/a
32	esv3515353	chr3:146385131-146394914	Enhancers	n/a	n/a	inside rSNPs	n/a
33	esv3435711	chr3:146385150-146394881	Enhancers	n/a	n/a	inside rSNPs	n/a
34	esv3464114	chr3:146385175-146394866	Enhancers	n/a	n/a	inside rSNPs	n/a
35	esv3515356	chr3:146385185-146394866	Enhancers	n/a	n/a	inside rSNPs	n/a
36	esv15132	chr3:146385189-146390341	Enhancers	n/a	n/a	inside rSNPs	n/a
37	nsv821286	chr3:146385189-146392579	Enhancers	n/a	n/a	inside rSNPs	n/a
38	esv3464116	chr3:146385189-146394864	Enhancers	n/a	n/a	inside rSNPs	n/a
39	esv3515357	chr3:146385189-146394864	Enhancers	n/a	n/a	inside rSNPs	n/a
40	nsv499017	chr3:146385190-146390405	Enhancers	n/a	n/a	inside rSNPs	n/a
41	nsv514173	chr3:146385550-146388606	Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:146386800-146387400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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